DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30002 and CG30287

DIOPT Version :10

Sequence 1:NP_001163100.1 Gene:CG30002 / 246384 FlyBaseID:FBgn0260474 Length:311 Species:Drosophila melanogaster
Sequence 2:NP_726083.1 Gene:CG30287 / 246530 FlyBaseID:FBgn0050287 Length:284 Species:Drosophila melanogaster


Alignment Length:257 Identity:83/257 - (32%)
Similarity:124/257 - (48%) Gaps:34/257 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 FMITGGRKSSLMSQPWMAFLHIASDLEMCRCGGSLISELFVLTAAHCFKMCPRSKEIRVWLGELD 124
            :.:..|:.:.|.|.|||.   |..:..|.:||||||:..:|||||||  ......::.|.||:.|
  Fly    40 YRVINGKPADLFSNPWMV---IIIERGMMKCGGSLITPRYVLTAAHC--KSETKSQLTVRLGDYD 99

  Fly   125 LSSTSDCTTYNYERVCAPPVEEFTIDKWILHEEFNLFYPGYDIALIKLNKKVVFKDHIRPICLPL 189
            ::...||::|.    |.|...|..:.:..:...:..|... ||||::|...|.:.|:||.|||.:
  Fly   100 VNQAVDCSSYG----CIPRPREINVTRTYVPSHYTNFRKN-DIALLRLETTVQYGDNIRSICLLM 159

  Fly   190 TDELLAFT-----LQLGQRFMAVGWGKTES------LRYANSTMEVDIRTEKCTD--GR--DTSF 239
            .|    :|     |:...:|...|||:|||      |:.|:.|..   ....|..  |:  |.|.
  Fly   160 GD----YTWSSNILKNLVKFNTTGWGRTESRINSPVLQQASLTHH---HLSYCAQVFGKQLDKSH 217

  Fly   240 LCASGDYVDTCNGDSGGPLLWKTTLFGKDRAVQFGVVSTGSQNCGAGHKAYYMDVPTYMPWI 301
            :|.:.....||.|||||||..:..:..:.|.:.|||||.|:.:|..  ...|.:|..:..||
  Fly   218 ICVASSTGSTCQGDSGGPLTARVRIGSERRVILFGVVSYGAVHCFG--PTVYTNVIHFANWI 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30002NP_001163100.1 Tryp_SPc 62..301 CDD:238113 81/253 (32%)
CG30287NP_726083.1 Tryp_SPc 42..280 CDD:238113 83/255 (33%)

Return to query results.
Submit another query.