DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30002 and CG30187

DIOPT Version :10

Sequence 1:NP_001163100.1 Gene:CG30002 / 246384 FlyBaseID:FBgn0260474 Length:311 Species:Drosophila melanogaster
Sequence 2:NP_001246475.2 Gene:CG30187 / 246509 FlyBaseID:FBgn0050187 Length:500 Species:Drosophila melanogaster


Alignment Length:297 Identity:90/297 - (30%)
Similarity:142/297 - (47%) Gaps:55/297 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 WTPGQRLVYENLTQQDCGVRSNQIPAVRIRFMITGGRKSSLMSQPWMAFLHIASDLEMCRCGGSL 94
            |.|   :::..|......:..:||..:.|...||||..::..:..|||.:|..:..   .|||:|
  Fly     7 WIP---VIFWFLKDVGASIFLDQICGINIALKITGGHNAAFQNSVWMAAVHNRTHF---ICGGTL 65

  Fly    95 ISELFVLTAAHCFKMCPRSKEIRVWLGELDLSSTSDCTTYNYERVCAPPVEEFTIDKWILHEEFN 159
            |.:.||||||||             :.:.|:.|.| ...||.    :.|.:...:...::|..|:
  Fly    66 IHKRFVLTAAHC-------------IVDQDVQSVS-LGAYNK----SDPADRKDVITAVVHSSFD 112

  Fly   160 LFYPGY--DIALIKLNKKVVFKDHIRPICLPLTDELLAFTLQLGQRFMAVGWGKTESLRYANSTM 222
            : ...|  ||.|:||:..|:|...|||||:.| ::.:|..::..:.|.|.|||   :|| .|.|.
  Fly   113 V-RASYENDIGLLKLSSDVIFNALIRPICIVL-NKSMANHMRNMRTFKAFGWG---TLR-GNKTS 171

  Fly   223 EV-------DIRTEKCTDGRDTSF------LCASGDYVDTCNGDSGGPLLWKTTLFG-KDRAVQF 273
            ::       .:..|:|.  .:.|.      :||.....|||.|||||||.....:.| .:|.|||
  Fly   172 DILQTIILNHLDREECY--MELSVYPSEKQICAGVPSGDTCGGDSGGPLTNDVFIQGIGNREVQF 234

  Fly   274 GVVSTGSQNC-GAGHKAYYMDVPTYMPWI---LEKMA 306
            |::|.|..:| |.|   .|.|:.::..||   :|:::
  Fly   235 GIISVGKTSCDGQG---VYTDLMSFADWIKMTIERLS 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30002NP_001163100.1 Tryp_SPc 62..301 CDD:238113 81/255 (32%)
CG30187NP_001246475.2 Tryp_SPc 35..260 CDD:214473 81/256 (32%)
Trypsin 316..>384 CDD:459667
Blue background indicates that the domain is not in the aligned region.

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