DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30002 and CG30088

DIOPT Version :10

Sequence 1:NP_001163100.1 Gene:CG30002 / 246384 FlyBaseID:FBgn0260474 Length:311 Species:Drosophila melanogaster
Sequence 2:NP_725488.3 Gene:CG30088 / 246447 FlyBaseID:FBgn0050088 Length:281 Species:Drosophila melanogaster


Alignment Length:312 Identity:104/312 - (33%)
Similarity:149/312 - (47%) Gaps:51/312 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNSPLAITALVWGILCL-TCPPLSEAGMEDWTPGQRLVYENLTQQDCGVRSNQIPAVRIRFMITG 64
            |:..||.|::   .:|: .|..|.|.           |..|.....|||......|.|    |..
  Fly     1 MSISLASTSI---YICMCVCLVLQEQ-----------VAANFLIPSCGVSYESNVATR----IVR 47

  Fly    65 GRKSSLMSQPWMAFLHIASDLEMCRCGGSLISELFVLTAAHCFKMCPRSKEIRVWLGELDLSSTS 129
            |:::.|.|.|:||:|:.:|::   .|||::||..::||||||.:     ..::|.|||.|::...
  Fly    48 GKEAMLKSAPFMAYLYYSSEI---HCGGTIISSRYILTAAHCMR-----PYLKVRLGEHDITRNP 104

  Fly   130 DCTTYNYERVCAPPVEEFTIDKWILHEEFNLFYPGYDIALIKLNKKVVFKDHIRPICLPLTDELL 194
            ||...:    |:||.|||.|.....::.|:.|... ||||:||::.:.|..||:||||.|.....
  Fly   105 DCQGGS----CSPPAEEFDIVLATKYKRFDRFLAN-DIALLKLSRNIRFNVHIQPICLILNPAAA 164

  Fly   195 AFTLQLGQRFMAVGWGKTESLRYANSTMEVDIRTEKCTDGR----------DTSFLCASGDYVDT 249
            ...    ..|.|.|||:||:...|| .::..:.|.  .|.|          ..:.||......||
  Fly   165 PNV----HEFQAFGWGQTETNHSAN-VLQTTVLTR--YDNRHCRSVLSMPITINQLCVGFQGSDT 222

  Fly   250 CNGDSGGPLLWKTTLFGKDRAVQFGVVSTGSQNCGAGHKAYYMDVPTYMPWI 301
            |:|||||||:.|....|..|.:|.|:||.|...|.:  ...|..||.|:.||
  Fly   223 CSGDSGGPLVTKVNYDGVWRYLQLGIVSFGDDKCQS--PGVYTYVPNYIRWI 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30002NP_001163100.1 Tryp_SPc 62..301 CDD:238113 87/248 (35%)
CG30088NP_725488.3 Tryp_SPc 45..273 CDD:238113 89/250 (36%)

Return to query results.
Submit another query.