DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30002 and CG30087

DIOPT Version :10

Sequence 1:NP_001163100.1 Gene:CG30002 / 246384 FlyBaseID:FBgn0260474 Length:311 Species:Drosophila melanogaster
Sequence 2:NP_725489.2 Gene:CG30087 / 246446 FlyBaseID:FBgn0050087 Length:277 Species:Drosophila melanogaster


Alignment Length:283 Identity:91/283 - (32%)
Similarity:142/283 - (50%) Gaps:37/283 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 QRLVYENLTQQDCGVRSNQIPAVRIRFMITGGRKSSLMSQPWMAFLHIASDLEMCRCGGSLISEL 98
            ||:|........|||......|:|    :..|:::.:.|.|:|.::   ::..:..||||:::..
  Fly    18 QRIVDAQFLNPLCGVTYESQTAMR----VVNGKEAVIRSAPFMVYV---TNNSLTHCGGSILNSR 75

  Fly    99 FVLTAAHCFKMCPRSKEIRVWLGELDLSSTSDCTTYNYERVCAPPVEEFTIDKWILHEEFNLFYP 163
            ::||||||  :.|   .:|:.|||.::.:..||...|    |:|..||:.|.|.|.|..:|....
  Fly    76 YILTAAHC--VFP---NLRLRLGEHNIRTDPDCQGSN----CSPRSEEYGIMKAITHRFYNAANH 131

  Fly   164 GYDIALIKLNKKVVFKDHIRPICLPLTDELLAFTLQLGQRFMAVGWGKTESLRYANSTMEVDIR- 227
            ..||||:|||:.:.|..||:|||: |.:...|.::...|.|   |||:|:...:.:.....::| 
  Fly   132 VNDIALLKLNRSINFNVHIQPICI-LLNPASAPSVATYQTF---GWGETKKNGFPHLLQTAELRA 192

  Fly   228 --TEKCTDGRDTSF--------LCASGDYVDTCNGDSGGPLLWKTTLFGKDRAVQFGVVSTGSQN 282
              ...|:    .||        :||..:..|||.|||||||:.:....|..|.:|.|:||.|..:
  Fly   193 YDAAYCS----RSFHAYMNGNQICAGHEERDTCAGDSGGPLVTRVDFDGVKRYLQLGIVSYGPTD 253

  Fly   283 CGAGHKAYYMDVPTYMPWILEKM 305
            |.:  ...|..||.|:.||...|
  Fly   254 CQS--PGVYTYVPNYINWIRRAM 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30002NP_001163100.1 Tryp_SPc 62..301 CDD:238113 80/249 (32%)
CG30087NP_725489.2 Tryp_SPc 42..272 CDD:238113 82/251 (33%)

Return to query results.
Submit another query.