DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30002 and CG43110

DIOPT Version :10

Sequence 1:NP_001163100.1 Gene:CG30002 / 246384 FlyBaseID:FBgn0260474 Length:311 Species:Drosophila melanogaster
Sequence 2:NP_001246396.1 Gene:CG43110 / 12798330 FlyBaseID:FBgn0262570 Length:483 Species:Drosophila melanogaster


Alignment Length:301 Identity:92/301 - (30%)
Similarity:134/301 - (44%) Gaps:62/301 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 VWGILCL--TCPPLSEAGMEDWTPGQRLVYENLTQQDCGVRSNQIPAVRIRFMITGGRKSSLMSQ 73
            ||..||.  :|               :|.|....:|.||  ...:|      .|..|..:|..|.
  Fly     6 VWIFLCSLGSC---------------QLAYSMFLKQPCG--KTPVP------KIISGSNASQQSA 47

  Fly    74 PWMAFLHIASDLEMCRCGGSLISELFVLTAAHCFKMCPRSKEIRVWLGELDLSSTSDCTTYNYER 138
            .:||.:...:.|   .|||::|.|.||||.||    |..::.:.|.||           .||...
  Fly    48 QYMAGIFNTTHL---LCGGTIIHEDFVLTVAH----CKSTQTLFVRLG-----------AYNINH 94

  Fly   139 VCAPPVEEFTIDKWILHEEFNLFYPGYDIALIKLNKKVVFKDHIRPICLPLTDELLAFTLQLGQR 203
                |.::..:.:.|.|.:::......||||:||.:.|:|..:|:|||:.| |..|...::.   
  Fly    95 ----PTDQIRVIETIAHPQYSNSTYANDIALVKLERSVIFNLNIQPICIHL-DATLGKQIRY--- 151

  Fly   204 FMAVGWGKTESLRYANSTMEVDI-RTEKCT------DGRDTSFLCASGDYVDTCNGDSGGPLLWK 261
            :.|.|||:|.:...::....:.: ||....      ...|...:||:.|..|||.|||||||:.|
  Fly   152 YNAFGWGRTRNAEQSDILQRIFVNRTNPMICHLYLGMSPDPKQICATTDQGDTCAGDSGGPLISK 216

  Fly   262 TTLFGKDRAVQFGVVSTGSQNC-GAGHKAYYMDVPTYMPWI 301
            .|..||:...|||:.|.|::.| |.|   .|.||..|..||
  Fly   217 ITYQGKNFDTQFGITSYGTRECNGVG---LYTDVSQYSGWI 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30002NP_001163100.1 Tryp_SPc 62..301 CDD:238113 79/246 (32%)
CG43110NP_001246396.1 Tryp_SPc 36..257 CDD:238113 81/248 (33%)

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