DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30002 and cfb

DIOPT Version :10

Sequence 1:NP_001163100.1 Gene:CG30002 / 246384 FlyBaseID:FBgn0260474 Length:311 Species:Drosophila melanogaster
Sequence 2:XP_031747347.1 Gene:cfb / 100491419 XenbaseID:XB-GENE-479361 Length:745 Species:Xenopus tropicalis


Alignment Length:286 Identity:81/286 - (28%)
Similarity:128/286 - (44%) Gaps:77/286 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 PWMAFLHIA-SDLEMCRCGGSLISELFVLTAAHCFKMCPRSKEIRVWLG--ELDLSSTSDCTTYN 135
            ||:|.:.|: |.::.|:  |:::|..|:|||||||.:..::::|:|.:.  |..:........||
 Frog   475 PWIAKITISGSSVQYCK--GTILSPYFILTAAHCFHLDDKNQKIQVIVDGKEYPVKQPYRHPKYN 537

  Fly   136 YERVCAPPVEEFTIDKWILHEEFNLFYPGYDIALIKLNKKVVFKDHIRPICLPLT---------- 190
                   |:.:  :||.| ...|:     ||:.|::|.||:.|....||||:|.|          
 Frog   538 -------PISK--VDKNI-KRAFD-----YDVELLELQKKIEFSVTARPICIPCTQSTAQVLKVP 587

  Fly   191 --------------DELLAFTL------QLGQRFMAV--GWGKTESLRYANSTMEVDIRTEKCTD 233
                          :|:.|..:      .|.|:.:.:  |..:|..|..|....|:    :..||
 Frog   588 GAPCSSHEKALLSEEEVKAIFIAEESKNPLEQKNVIIKRGSKRTACLEAAKKAPEL----KNVTD 648

  Fly   234 GRDT---SFLCASG--DYVD--TCNGDSGGPLLWKTTLFGKDRAVQFGVVSTGS-QNCGAG---- 286
            ..|.   .|||..|  ..||  .|.|||||||:...    :.|.||.|::|.|: .:|..|    
 Frog   649 IEDAVTEQFLCTGGIEPVVDPPVCKGDSGGPLIIPV----RRRYVQVGIISWGTVDHCENGKRVK 709

  Fly   287 --HK---AYYMDVPTYMPWILEKMAE 307
              ||   .:|.|:...:|||.:.:.|
 Frog   710 QTHKNARDFYQDIFKVLPWIKKVLEE 735

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30002NP_001163100.1 Tryp_SPc 62..301 CDD:238113 78/278 (28%)
cfbXP_031747347.1 PHA02927 <35..195 CDD:222943
vWA_complement_factors 240..442 CDD:238747
Tryp_SPc 474..732 CDD:238113 80/281 (28%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.