DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tp63 and p53

DIOPT Version :9

Sequence 1:NP_062094.1 Gene:Tp63 / 246334 RGDID:620863 Length:680 Species:Rattus norvegicus
Sequence 2:NP_996267.1 Gene:p53 / 2768677 FlyBaseID:FBgn0039044 Length:495 Species:Drosophila melanogaster


Alignment Length:512 Identity:105/512 - (20%)
Similarity:184/512 - (35%) Gaps:112/512 - (21%)


- Green bases have known domain annotations that are detailed below.


  Rat    29 FSWKESYYRSAMSQSTQTSEFLSPEVFQHIWDFLEQPICSVQPIDLNFVDEPSENGATNKIEISM 93
            ||...:...|.:|:|...:.|.:.:.|...||...:       :........|.|||.| :..|.
  Fly     9 FSLTFNQNTSIVSRSNSRTIFEAFKEFLDFWDIGNE-------VSAESAVRVSSNGAFN-LPQSF 65

  Rat    94 DCIRMQDSDLSDPMWPQYTNLGLLNGMDQQIQNGSSSTSPYNTDHAQNSVTAPSPYAQPSSTFDA 158
            .....:.:.|:.|:.|.|......|.|  |..|.....:..|:| ..|.:.|.:.:.....| |:
  Fly    66 GNESNEYAHLATPVDPAYGGNNTNNMM--QFTNNLEILANNNSD-GNNKINACNKFVCHKGT-DS 126

  Rat   159 LSPSPAIPSNTDYP------------GPHSF------------------------DVSFQQSSTA 187
            ...|..:....|.|            .|.:|                        |:..|.::..
  Fly   127 EDDSTEVDIKEDIPKTVEVSGSELTTEPMAFLQGLNSGNLMQFSQQSVLREMMLQDIQIQANTLP 191

  Rat   188 K-------------------SATWTYSTELKKLYCQIAKTCPIQIKVMTPPP-QGAVIRAMPVYK 232
            |                   .:.|.||..|.|||.::.|...:.::..:..| |...:|....: 
  Fly   192 KLENHNIGGYCFSMVLDEPPKSLWMYSIPLNKLYIRMNKAFNVDVQFKSKMPIQPLNLRVFLCF- 255

  Rat   233 KAEHVTEVVKRCPNHELSREFNEGQIAPPSHLIRVE-------GNSHAQYVEDPITGRQSVLVPY 290
             :..|:..|.||.||................|:|.|       ||:..:.:.:    |.||:||.
  Fly   256 -SNDVSAPVVRCQNHLSVEPLTANNAKMRESLLRSENPNSVYCGNAQGKGISE----RFSVVVPL 315

  Rat   291 ----EPPQVGTEFTTVLYNFMCNSSCVGGMNRRPILIIVTLETRDGQVLGRRCFEARICACPGRD 351
                ...:.|....|:.:.|:|.:||:|   |:...::..||...|.::|:.....:||.||.||
  Fly   316 NMSRSVTRSGLTRQTLAFKFVCQNSCIG---RKETSLVFCLEKACGDIVGQHVIHVKICTCPKRD 377

  Rat   352 RKADE---DSIRKQQVSDSAKNGDGTK--RPFRQNTHGIQMTSIKK----------RRSPD-DEL 400
            |..||   :|.:::.|.::|:..:.:|  |.....|...:....:.          .|:|| |..
  Fly   378 RIQDERQLNSKKRKSVPEAAEEDEPSKVRRCIAIKTEDTESNDSRDCDDSAAEWNVSRTPDGDYR 442

  Rat   401 LYLPVRGRETYEMLLKIKESLELMQYLPQHTIETYRQQQQQQHQHLLQKQTSMQSQS 457
            |.:....:|.      :.:|:|.|  :.:...|..|...|:..:....|..|::.::
  Fly   443 LAITCPNKEW------LLQSIEGM--IKEAAAEVLRNPNQENLRRHANKLLSLKKRA 491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tp63NP_062094.1 Transcription activation. /evidence=ECO:0000250 1..107 16/77 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 122..171 9/48 (19%)
P53 163..358 CDD:279242 55/264 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 351..393 10/56 (18%)
Interaction with HIPK2. /evidence=ECO:0000250 352..388 9/40 (23%)
P53_tetramer 391..431 CDD:285011 9/50 (18%)
Oligomerization. /evidence=ECO:0000250 394..443 12/49 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 436..472 4/22 (18%)
Forkhead_N 452..>534 CDD:254796 1/6 (17%)
SAM 541..606 CDD:197735
SAM_tumor-p63 543..607 CDD:188971
Transactivation inhibition. /evidence=ECO:0000250 610..680
p53NP_996267.1 P53 203..383 CDD:176262 47/188 (25%)
P53_C 429..495 CDD:288471 14/71 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166340689
Domainoid 1 1.000 65 1.000 Domainoid score I9777
eggNOG 1 0.900 - - E1_2C1DX
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002925
OrthoInspector 1 1.000 - - otm45413
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11447
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
98.800

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