| Sequence 1: | NP_001374771.1 | Gene: | CNOT6L / 246175 | HGNCID: | 18042 | Length: | 616 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_849185.2 | Gene: | Cnot6l / 231464 | MGIID: | 2443154 | Length: | 555 | Species: | Mus musculus |
| Alignment Length: | 553 | Identity: | 542/553 - (98%) |
|---|---|---|---|
| Similarity: | 548/553 - (99%) | Gaps: | 0/553 - (0%) |
- Green bases have known domain annotations that are detailed below.
|
Human 64 LIGMPKEKYDPPDPRRIYTIMSAEEVANGKKSHWAELEISGRVRSLSTSLWSLTHLTALHLNDNY 128
Human 129 LSRIPPDIAKLHNLVYLDLSSNKLRSLPAELGNMVSLRELLLNNNLLRVLPYELGRLFQLQTLGL 193
Human 194 KGNPLSQDILNLYQDPDGTRKLLNFMLDNLAVHPEQLPPRPWITLKERDQILPSASFTVMCYNVL 258
Human 259 CDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNCDADIISLQEVETEQYFTLFLPALKERGYDGF 323
Human 324 FSPKSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQVAMANSDGSEAMLNRVMTKDNIG 388
Human 389 VAVVLEVHKELFGAGMKPIHAADKQLLIVANAHMHWDPEYSDVKLIQTMMFVSEVKNILEKASSR 453
Human 454 PGSPTADPNSIPLVLCADLNSLPDSGVVEYLSNGGVADNHKDFKELRYNECLMNFSCNGKNGSSE 518
Human 519 GRITHGFQLKSAYENNLMPYTNYTFDFKGVIDYIFYSKTHMNVLGVLGPLDPQWLVENNITGCPH 583
Human 584 PHIPSDHFSLLTQLELHPPLLPLVNGVHLPNRR 616 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CNOT6L | NP_001374771.1 | leucine-rich repeat | 99..118 | CDD:275378 | 18/18 (100%) |
| LRR | <118..>244 | CDD:227223 | 118/125 (94%) | ||
| leucine-rich repeat | 119..141 | CDD:275378 | 19/21 (90%) | ||
| leucine-rich repeat | 142..156 | CDD:275378 | 13/13 (100%) | ||
| Deadenylase_CCR4b | 252..599 | CDD:197339 | 342/346 (99%) | ||
| Cnot6l | NP_849185.2 | Required for interaction with CNOT1, CNOT3 and CNOT7. /evidence=ECO:0000250 | 1..152 | 141/148 (95%) | |
| leucine-rich repeat | 38..57 | CDD:275378 | 18/18 (100%) | ||
| LRR | <57..>183 | CDD:227223 | 118/125 (94%) | ||
| leucine-rich repeat | 58..80 | CDD:275378 | 19/21 (90%) | ||
| leucine-rich repeat | 81..103 | CDD:275378 | 21/21 (100%) | ||
| leucine-rich repeat | 104..126 | CDD:275378 | 19/21 (90%) | ||
| leucine-rich repeat | 127..138 | CDD:275378 | 9/10 (90%) | ||
| Nuclease domain. /evidence=ECO:0000250 | 158..555 | 392/396 (99%) | |||
| Deadenylase_CCR4b | 191..538 | CDD:197339 | 342/346 (99%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C83961625 | |
| Domainoid | 1 | 1.000 | 690 | 1.000 | Domainoid score | I3906 |
| eggNOG | 1 | 0.900 | - | - | E1_COG5239 | |
| HGNC | 1 | 1.500 | - | - | ||
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 1 | 1.000 | - | - | H100830 | |
| Inparanoid | 1 | 1.050 | 1114 | 1.000 | Inparanoid score | I4939 |
| Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S1162 |
| NCBI | 1 | 1.000 | - | - | ||
| OMA | 1 | 1.010 | - | - | QHG57444 | |
| OrthoDB | 1 | 1.010 | - | - | D724242at2759 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0002437 | |
| OrthoInspector | 1 | 1.000 | - | - | oto128283 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_101771 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR12121 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3216 |
| SonicParanoid | 1 | 1.000 | - | - | X1441 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 19 | 19.290 | |||||