DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gnal and Galphaq

DIOPT Version :9

Sequence 1:NP_001178765.1 Gene:Gnal / 24611 RGDID:2715 Length:450 Species:Rattus norvegicus
Sequence 2:NP_725192.2 Gene:Galphaq / 36384 FlyBaseID:FBgn0004435 Length:396 Species:Drosophila melanogaster


Alignment Length:410 Identity:152/410 - (37%)
Similarity:230/410 - (56%) Gaps:66/410 - (16%)


- Green bases have known domain annotations that are detailed below.


  Rat    85 EAAKEARKVSRGIDRMLREQKRDLQQTHRLLLLGAGESGKSTIVKQMRILHVNGFNPEEKKQKIL 149
            |.|||.:::::.|::.||..|||.::..:|||||.|||||||.:|||||:|.:|::.|:|:..|.
  Fly     7 EEAKEQKRINQEIEKQLRRDKRDARRELKLLLLGTGESGKSTFIKQMRIIHGSGYSDEDKRGYIK 71

  Rat   150 DIRKNVKDAIVTIVSAMSTIIPPVPLANPENQFRSDYIKSI--APITDFEYSQEFFDHVKKLWDD 212
            .:.:|:..|:.:::.||..:  .:.....|:...:|.:.||  ..:|.||  ..:.:.:|.||||
  Fly    72 LVFQNIFMAMQSMIKAMDML--KISYGQGEHSELADLVMSIDYETVTTFE--DPYLNAIKTLWDD 132

  Rat   213 EGVKACFERSNEYQLIDCAQYFLERIDSVS----------------------------------- 242
            .|::.|::|..||||.|.|:|:|:.:|.|:                                   
  Fly   133 AGIQECYDRRREYQLTDSAKYYLKDLDRVAQPAYLPTEQDILRVRVPTTGIIEYPFDLEEIRFSY 197

  Rat   243 --------LVDYTPTDQDLLRCRVLTSGIFETRFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTA 299
                    ..||.||:||:||.||.|:||.|..|.:|.:.|.|.||||||.||||||.||.:||:
  Fly   198 LSDLARIEQADYLPTEQDILRARVPTTGILEYPFDLDGIVFRMVDVGGQRSERRKWIHCFENVTS 262

  Rat   300 IIYVAACSSYNMVIREDNNTNRLRESLDLFESIWNNRWLRTISIILFLNKQDMLAEKVLAGKSKI 364
            ||::.|.|.|:.::.|.:|.||:.||..||.:|....|.:..|:||||||:|:|.||::  .|.:
  Fly   263 IIFLVALSEYDQILFESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEEKIM--YSHL 325

  Rat   365 EDYFPEYANYTVPEDATPDAGEDPKVTRAKFFIRDLFLRISTATGDGKHYCYPHFTCAVDTENIR 429
            .||||||           |..:...:|..:|.:| :|:.::.   |.:...|.|||||.|||||:
  Fly   326 VDYFPEY-----------DGPQRDAITAREFILR-MFVDLNP---DSEKIIYSHFTCATDTENIK 375

  Rat   430 RVFNDCRDIIQRMHLKQYEL 449
            .||...:|.|.:..||::.|
  Fly   376 LVFCAVKDTIMQNALKEFNL 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GnalNP_001178765.1 G_alpha 93..447 CDD:214595 147/398 (37%)
G-alpha 112..444 CDD:206639 139/376 (37%)
GalphaqNP_725192.2 G-alpha 34..390 CDD:206639 139/376 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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