DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Npr1 and Gyc89Db

DIOPT Version :9

Sequence 1:NP_036745.1 Gene:Npr1 / 24603 RGDID:3195 Length:1057 Species:Rattus norvegicus
Sequence 2:NP_650551.1 Gene:Gyc89Db / 42002 FlyBaseID:FBgn0038436 Length:669 Species:Drosophila melanogaster


Alignment Length:593 Identity:163/593 - (27%)
Similarity:262/593 - (44%) Gaps:136/593 - (22%)


- Green bases have known domain annotations that are detailed below.


  Rat   530 SGRG--SNY--GSLLTTEGQFQVFAKTAYYKGNLVAVKRVNRKRIELTRKVLFEL-KHMRDVQN- 588
            |||.  |.|  |.:.....:|.....|||...:...:.......|:||...|..: |:..|..| 
  Fly   135 SGRTGMSKYLIGQMTEVAKEFYGLDMTAYVLESQNDICGGTAGPIKLTEGPLTVIVKYRLDFDNR 199

  Rat   589 EHLTRFVGACTDPPNICILTEYCPRGSLQDILE--NESITLDWMFRYSLTNDIVKGMLFLHNGA- 650
            :::.:.|.....|..:.:     |...|...||  ..:|.||...:.:|..:.:.....|||.. 
  Fly   200 DYMAKRVNVIAHPSQLKM-----PSVDLNVFLELFPFTIVLDHDMKITLAGEKIVETWILHNPGV 259

  Rat   651 -----ICSHGNLKSSNC------------VVDGRFVL----------------KITDYGLESFRD 682
                 |.|| .|:...|            ::..|.||                ...::..|:|.:
  Fly   260 NPKTFIGSH-ILERFKCRRPKDTQIQWETILQMRTVLFEFELIRTGHNRAAYDAALNFDFENFDE 323

  Rat   683 P---EPEQGHTLFAKKLWTAPELLRMAS---------PPARGSQAGDVYSFGIILQEIALRSGVF 735
            .   ...|...|.:.|.::|......|:         .||.|.:.   :|.|  |:.|.|:..:|
  Fly   324 ASSLNEAQAMALASAKEFSAENAKEEAAAAATSKDEIDPATGQRR---HSVG--LRSILLKGQMF 383

  Rat   736 YVEGLD-----LSPKEIIERVTRGEQPPFRPSMDLQSHLEELGQLMQRCWAEDPQERPPFQQIRL 795
            |::.:|     .||  :||                  :|:||                  ..|.|
  Fly   384 YIKDVDSLIFLCSP--LIE------------------NLDEL------------------HGIGL 410

  Rat   796 ALRKFNKENSS-----------NILDNLLSRMEQYANNLEELVEERTQAYLEE--KRKAEALLYQ 847
            .|...|....|           :.|:.:..:.||.::.||:.:|      |.:  ||:.:.|||.
  Fly   411 YLNDLNPHGLSRELVMAGWQHCSKLEIMFEKEEQRSDELEKSLE------LADSWKRQGDELLYS 469

  Rat   848 ILPHSVAEQLKRGETVQAEAFDSVTIYFSDIVGFTALSAES--TPMQVVTLLNDLYTCFDAVIDN 910
            ::|..:||::::.|....::|:.|::.|.:::......:.:  ..||.||.||.:::..|..|.:
  Fly   470 MIPRPIAERMRKSEEHVCQSFEEVSVIFIEVMNIYDSGSNNIQDAMQAVTTLNKVFSALDEEIIS 534

  Rat   911 FDVYKVETIGDAYMVVSGLPVRNGQLHAREVARMALALLDAVRSFRIRHRPQEQLRLRIGIHTGP 975
            ..||||||:|..||.|||.|..| .|||.....:||.::..|::..:     ..:.:|:||::||
  Fly   535 PFVYKVETVGMVYMAVSGAPDVN-PLHAEHACDLALRVMKKVKAHAL-----PGVAIRVGINSGP 593

  Rat   976 VCAGVVGLKMPRYCLFGDTVNTASRMESNGEALKIHLSSETKAVLEEFDGFELELRGDVEMKGKG 1040
            |.|||||:|:||||||||||||||||||:.:...|.||:.|...:::. |:::|.||.|::||||
  Fly   594 VVAGVVGMKVPRYCLFGDTVNTASRMESSSDPWMIQLSNYTALKVQKV-GYKVEARGFVKVKGKG 657

  Rat  1041 KVRTYWLL 1048
            ::.|||||
  Fly   658 EMETYWLL 665

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Npr1NP_036745.1 PBP1_NPR_A 32..439 CDD:107380
ANF_receptor 50..410 CDD:279440
PK_GC-A_B 530..803 CDD:270944 67/331 (20%)
TyrKc 543..797 CDD:197581 59/308 (19%)
HNOBA <812..857 CDD:285003 14/46 (30%)
CYCc 836..1025 CDD:214485 74/192 (39%)
Guanylate_cyc 863..1049 CDD:278633 79/188 (42%)
Gyc89DbNP_650551.1 HNOB 2..161 CDD:400167 7/25 (28%)
HNOBA 218..479 CDD:400168 64/310 (21%)
Nucleotidyl_cyc_III 488..665 CDD:416391 77/183 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2114
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.