| Sequence 1: | XP_011508641.1 | Gene: | ATP6V1C2 / 245973 | HGNCID: | 18264 | Length: | 437 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_017449730.2 | Gene: | Atp6v1c2 / 362802 | RGDID: | 1359430 | Length: | 448 | Species: | Rattus norvegicus |
| Alignment Length: | 460 | Identity: | 393/460 - (85%) |
|---|---|---|---|
| Similarity: | 407/460 - (88%) | Gaps: | 35/460 - (7%) |
- Green bases have known domain annotations that are detailed below.
|
Human 1 MSEFWLISAPGDKENLQALERMNTVTSKSNLSYNTKFAIPDFKVGTLDSLVGLSDELGKLDTFAE 65
Human 66 -----------------------SLIRRMAQSVVEVMEDSKGKVQEHLLANGGLKGKMKCLKIDL 107
Human 108 TSFVTHFEWDMAKYPVKQPLVSVVDTIAKQLAQIEMDLKSRTAAYNTLKTNLENLEKKSMGNLFT 172
Human 173 RTLSDIVSKEDFVLDSEYLVTLLVIVPKPNYSQWQKTYESLSDMVVPRSTKLITEDKEGGLFTVT 237
Human 238 LFRKVIEDFKTKAKENKFTVREFYYDEKEIEREREEMARLLSDKKQQYQTSCVALKKGSSTFPDH 302
Human 303 KVKVTPLGNPDRPAAGQTDRERESEGEGEGPLLRWLKVNFSEAFIAWIHIKALRVFVESVLRYGL 367
Human 368 PVNFQAVLLQPHKKSSTKRLREVLNSVFRHLDEVAATSILDASVEIPGLQLNNQDYFPYVYFHID 432
Human 433 LSLLD 437 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| ATP6V1C2 | XP_011508641.1 | V-ATPase_C | 5..427 | CDD:397366 | 377/444 (85%) |
| 3-helical coiled coil | 55..75 | CDD:270211 | 18/42 (43%) | ||
| 3-helical coiled coil | 130..156 | CDD:270211 | 21/25 (84%) | ||
| 3-helical coiled coil | 284..361 | CDD:270211 | 68/76 (89%) | ||
| Atp6v1c2 | XP_017449730.2 | V-ATPase_C | 5..438 | CDD:397366 | 377/444 (85%) |
| 3-helical coiled coil | 55..98 | CDD:270211 | 18/42 (43%) | ||
| 3-helical coiled coil | 143..169 | CDD:270211 | 21/25 (84%) | ||
| 3-helical coiled coil | 297..372 | CDD:270211 | 68/76 (89%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C83694072 | |
| Domainoid | 1 | 1.000 | 748 | 1.000 | Domainoid score | I3121 |
| eggNOG | 1 | 0.900 | - | - | E1_COG5127 | |
| HGNC | 1 | 1.500 | - | - | ||
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 1 | 1.000 | - | - | H15866 | |
| Inparanoid | 1 | 1.050 | 774 | 1.000 | Inparanoid score | I7832 |
| NCBI | 1 | 1.000 | - | - | ||
| OMA | 1 | 1.010 | - | - | QHG54067 | |
| OrthoDB | 1 | 1.010 | - | - | D1016088at2759 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0001981 | |
| OrthoInspector | 1 | 1.000 | - | - | oto137993 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_117457 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR10137 |
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 1 | 1.000 | - | - | X1294 | |
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 16 | 16.310 | |||||