DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Myh3 and zip

DIOPT Version :9

Sequence 1:NP_036736.1 Gene:Myh3 / 24583 RGDID:3138 Length:1940 Species:Rattus norvegicus
Sequence 2:NP_523860.2 Gene:zip / 38001 FlyBaseID:FBgn0265434 Length:2056 Species:Drosophila melanogaster


Alignment Length:1998 Identity:779/1998 - (38%)
Similarity:1197/1998 - (59%) Gaps:107/1998 - (5%)


- Green bases have known domain annotations that are detailed below.


  Rat    15 PFLRKSEKERIE----AQNQPFDAKTYCFVVDSKEEYAKGKIKSSQDGKVTVE-TEDNRTLVVKP 74
            |.|:....||.:    |....:..|...:|....:.:....||.....:|.|| .|..:.:::..
  Fly    55 PELKYLSVERNQFNDPATQAEWTQKRLVWVPHENQGFVAASIKREHGDEVEVELAETGKRVMILR 119

  Rat    75 EDVYAMNPPKFDKIEDMAMLTHLNEPAVLYNLKDRYTSWMIYTYSGLFCVTVNPYKWLPVYTPEV 139
            :|:..||||||||:||||.||.|||.:||:|:||||.|.:||||||||||.|||||.||:||.::
  Fly   120 DDIQKMNPPKFDKVEDMAELTCLNEASVLHNIKDRYYSGLIYTYSGLFCVVVNPYKKLPIYTEKI 184

  Rat   140 VDGYRGKKRQEAPPHIFSISDNAYQFMLTDRENQSILITGESGAGKTVNTKRVIQYFATIAATGD 204
            ::.|:|.||.|.|||:|:|:|:||:.||.|||:||||.|||||||||.|||:|||:.|.:||   
  Fly   185 MERYKGIKRHEVPPHVFAITDSAYRNMLGDREDQSILCTGESGAGKTENTKKVIQFLAYVAA--- 246

  Rat   205 LAKKKDS---------------------------------------KM--------KGTLEDQII 222
             :|.|.|                                       ||        :|.||.|::
  Fly   247 -SKPKGSGAVPHPAVLINFSVNTNKYIKVKIMAQNQNQTIEVVNGLKMVEVNSNCQEGELEQQLL 310

  Rat   223 SANPLLEAFGNAKTVRNDNSSRFGKFIRIHFGTTGKLASADIETYLLEKSRVTFQLKAERSYHIF 287
            .|||:||||||||||:|||||||||||||:|..:|.::.|:||||||||||...|.|.||::|||
  Fly   311 QANPILEAFGNAKTVKNDNSSRFGKFIRINFDASGFISGANIETYLLEKSRAIRQAKDERTFHIF 375

  Rat   288 YQILSNKKPELIELLLITTNPYDYPFISQGEILVASIDDREELLATDSAIDILGFTPEEKSGLYK 352
            ||:|:...||..|..:: .:...|.|:|.|.:.|..:||..|..||..:::|:|.|.|:.:.:::
  Fly   376 YQLLAGATPEQREKFIL-DDVKSYAFLSNGSLPVPGVDDYAEFQATVKSMNIMGMTSEDFNSIFR 439

  Rat   353 LTGAVMHYGNMKFKQKQREEQAE-PDGTEVADKTAYLMGLNSSDLLKALCFPRVKVGNEYVTKGQ 416
            :..||:.:|:|||:|::..:||. ||.| ||.|.|:|:||:.:|:.:|...||:|||.::|||.|
  Fly   440 IVSAVLLFGSMKFRQERNNDQATLPDNT-VAQKIAHLLGLSVTDMTRAFLTPRIKVGRDFVTKAQ 503

  Rat   417 TVDQVHHAVNALSKSVYEKLFLWMVTRINQQLD-TKLPRQHFIGVLDIAGFEIFEYNSLEQLCIN 480
            |.:||..||.|::|:.||::|.|:|.|||:.|| ||.....|||:||:|||||||.||.||||||
  Fly   504 TKEQVEFAVEAIAKACYERMFKWLVNRINRSLDRTKRQGASFIGILDMAGFEIFELNSFEQLCIN 568

  Rat   481 FTNEKLQQFFNHHMFVLEQEEYKKEGIEWTFIDFGMDLAACIELIEKPMGIFSILEEECMFPKAT 545
            :|||||||.|||.||:||||||::|||||.|||||:||...|:||:||.||.::|:|||.|||||
  Fly   569 YTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQPTIDLIDKPGGIMALLDEECWFPKAT 633

  Rat   546 DTSFKNKLYDQHLGKSNNFQKPKVVKG--KAEAHFSLIHYAGTVDYSVSGWLEKNKDPLNETVVG 608
            |.:|.:||...|      ...||.:|.  :..|.|:::||||.||||.:.||.||.|||||.:|.
  Fly   634 DKTFVDKLVSAH------SMHPKFMKTDFRGVADFAIVHYAGRVDYSAAKWLMKNMDPLNENIVS 692

  Rat   609 LYQKSSNRLLAHLY--------ATFATTDADGGKKKVAKKKGSSFQTVSALFRENLNKLMSNLRT 665
            |.|.|.:..:.:::        |..|.||...|    |:.:...|:|||.|::|.|.|||..||.
  Fly   693 LLQGSQDPFVVNIWKDAEIVGMAQQALTDTQFG----ARTRKGMFRTVSHLYKEQLAKLMDTLRN 753

  Rat   666 THPHFVRCIIPNETKTPGAMEHSLVLHQLRCNGVLEGIRICRKGFPNRILYGDFKQRYRVLNASA 730
            |:|:||||||||..|..|.::..|||.|||||||||||||||:||||||.:.:|:|||.:|..:.
  Fly   754 TNPNFVRCIIPNHEKRAGKIDAPLVLDQLRCNGVLEGIRICRQGFPNRIPFQEFRQRYELLTPNV 818

  Rat   731 IPEGQFIDSKKACEKLLASIDIDHTQYKFGHTKVFFKAGLLGTLEEMRDERLAKLITRTQAVCRG 795
            ||:| |:|.||||||::.::::|...|:.|.:|:||:||:|..|||.||.:::.||...||.|||
  Fly   819 IPKG-FMDGKKACEKMIQALELDSNLYRVGQSKIFFRAGVLAHLEEERDFKISDLIVNFQAFCRG 882

  Rat   796 FLMRVEFQKMMQRRESIFCIQYNIRAFMNVKHWPWMKLFFKIKPLLKSAETEKEMATMKEEFQKT 860
            ||.|..:||.:|:..:|..||.|..|::.:::|.|.:|:.|:||||:..:.|:::...::|.::.
  Fly   883 FLARRNYQKRLQQLNAIRIIQRNCAAYLKLRNWQWWRLYTKVKPLLEVTKQEEKLVQKEDELKQV 947

  Rat   861 KDELAKSEAKRKELEEKLVTLVQEKNDLQLQVQAESENLLDAEERCDQLIKAKFQLEAKIKEVTE 925
            :::|.......:|.|.|....:.||..|..|:|||.|...:|||...:|:..|.:||..::|:..
  Fly   948 REKLDTLAKNTQEYERKYQQALVEKTTLAEQLQAEIELCAEAEESRSRLMARKQELEDMMQELET 1012

  Rat   926 RAEDEEEINAELTAKKRKLEDECSELKKDIDDLELTLAKVEKEKHATENKVKNLTEELAGLDETI 990
            |.|:|||....|..:|:|||....:|::.:::.|....|::.||...:.|:|...|:||..|:..
  Fly  1013 RIEEEEERVLALGGEKKKLELNIQDLEEQLEEEEAARQKLQLEKVQLDAKIKKYEEDLALTDDQN 1077

  Rat   991 AKLTREKKALQEAHQQTLDDLQAEEDKVNSLSKLKSKLEQQVDDLESSLEQEKKLRVDLERNKRK 1055
            .||.:|||.|:|........|..||:|...|:|||:|.|..:.:||..|.::::.|.:.:|:|||
  Fly  1078 QKLLKEKKLLEERANDLSQTLAEEEEKAKHLAKLKAKHEATISELEERLHKDQQQRQESDRSKRK 1142

  Rat  1056 LEGDLKLAQESILDLENDKQQLDER----------LKKKDFEYSQLQSKVEDEQTLSLQLQKKIK 1110
            :|.:       :.||   |:||:||          |.|::.|.:|...::::|.......||..:
  Fly  1143 IETE-------VADL---KEQLNERRVQVDEMQAQLAKREEELTQTLLRIDEESATKATAQKAQR 1197

  Rat  1111 ELQARIEELEEEIEAERATRAKTEKQRSDYARELEELSERLEEAGGVTSTQIELNKKREAEFLKL 1175
            ||::::.|::|::|||:|.|||.||.|.|.:.|||.|...|.::...|:.|.||..|||.|...|
  Fly  1198 ELESQLAEIQEDLEAEKAARAKAEKVRRDLSEELEALKNELLDSLDTTAAQQELRSKREQELATL 1262

  Rat  1176 RRDLEEATLQHEATVATLRKKHADSAAELAEQIDNLQRVKQKLEKEKSEFKLEIDDLSSSVESVS 1240
            ::.|||.|:.||..:|.:|.||:.....:.:|::||::.|..|||.|...:.|..||::.:.||:
  Fly  1263 KKSLEEETVNHEGVLADMRHKHSQELNSINDQLENLRKAKTVLEKAKGTLEAENADLATELRSVN 1327

  Rat  1241 KSKANLEKICRTLEDQLSEARGKNEETQRSLSELTTQKSRLQTEAGELSRQLEEKESIVSQLSRS 1305
            .|:...::..:..|.|::|.:.|..|.:|:.|||..:.::||.||..::.||||.|...|...:|
  Fly  1328 SSRQENDRRRKQAESQIAELQVKLAEIERARSELQEKCTKLQQEAENITNQLEEAELKASAAVKS 1392

  Rat  1306 KQAFTQQIEELKRQLEEENKAKNALAHALQSSRHDCDLLREQYEEEQEGKAELQRALSKANSEVA 1370
            ......|:.|.::.||||.:.|..|:..|:....:.:.|:||.||:.|.|...:|.|::..:::.
  Fly  1393 ASNMESQLTEAQQLLEEETRQKLGLSSKLRQIESEKEALQEQLEEDDEAKRNYERKLAEVTTQMQ 1457

  Rat  1371 QWRTKYETDAIQRTEELEEAKKKLAQRLQDSEEQVEAVNAKCASLEKTKQRLQGEVEDLMVDVER 1435
            :.:.|.|.|| ...:||||.||:|.:.::..|.||:.:.|:...|:|:|:::|.|:||..:::|.
  Fly  1458 EIKKKAEEDA-DLAKELEEGKKRLNKDIEALERQVKELIAQNDRLDKSKKKIQSELEDATIELEA 1521

  Rat  1436 ANSLAAALDKKQRNFDKVLAEWKTKCEESQAELEAALKESRSLSTELFKLKNAYEEALDQLETVK 1500
            ..:....|:|||:||||:|||.|...|:...|.:.|.:|:|...|::..:....:||.|::|.::
  Fly  1522 QRTKVLELEKKQKNFDKILAEEKAISEQIAQERDTAEREAREKETKVLSVSRELDEAFDKIEDLE 1586

  Rat  1501 RENKNLEQEIADLTEQIAENGKSIHELEKSRKQMELEKADIQMALEEAEAALEHEEAKILRIQLE 1565
            .:.|.|:.|:.||........|::|||||:::.:|.:.|:::...||.|..|:..|...||:::.
  Fly  1587 NKRKTLQNELDDLANTQGTADKNVHELEKAKRALESQLAELKAQNEELEDDLQLTEDAKLRLEVN 1651

  Rat  1566 LTQVKSEIDRKIAEKDEEIEQLKRNYQRTVETMQGALDAEVRSRNEAIRLKKKMEGDLNEIEIQL 1630
            :..::|:.:|.:..|:|..|:.:|...:.:..::..||.|.:.|..|:..|||:||||.|||..:
  Fly  1652 MQALRSQFERDLLAKEEGAEEKRRGLVKQLRDLETELDEERKQRTAAVASKKKLEGDLKEIETTM 1716

  Rat  1631 SHANRQAAETIKHLRSVQGQLKDTQLHLDDALRGQEDLKEQLAIVERRANLLQAEVEELRATLEQ 1695
            ...|:...:.:||.:.:|.|:||.....::|...:|:|:......||:...|:|||.:|...|..
  Fly  1717 EMHNKVKEDALKHAKKLQAQVKDALRDAEEAKAAKEELQALSKEAERKVKALEAEVLQLTEDLAS 1781

  Rat  1696 TERARKLAEQELLDSNERVQLLHTQNTSLIHTKKKLETDLTQLQSEVEDASRDARNAEEKAKKAI 1760
            :||||:.||.|..:..|.:.....:.:.:|..|::||..:..|:.|:|:...::....::::||.
  Fly  1782 SERARRAAETERDELAEEIANNANKGSLMIDEKRRLEARIATLEEELEEEQSNSEVLLDRSRKAQ 1846

  Rat  1761 TDAAMMAEELKKEQDTSAHLERMKKNLEQTVKDLQHRLDEAEQLALKGGKKQIQKLETRIRELEF 1825
            .....:..||..|:..|...|..:..||:..|:|:.:|.|.|.......|..|..||.:|..||.
  Fly  1847 LQIEQLTTELANEKSNSQKNENGRALLERQNKELKAKLAEIETAQRTKVKATIATLEAKIANLEE 1911

  Rat  1826 ELEGEQKRNTESVKGLRKYERRVKELTYQSEEDRKNVLRLQDLVDKLQVKVKSYKRQAEEADEQA 1890
            :||.|.|......|..||.::::||||...|::|::|.:.::.:|||..::|..||..:|.:|:.
  Fly  1912 QLENEGKERLLQQKANRKMDKKIKELTMNIEDERRHVDQHKEQMDKLNSRIKLLKRNLDETEEEL 1976

  Rat  1891 NVHLTKFRKAQHELEEAEERADIAESQVNKLRAKTR-----DFTSSRM 1933
            ....|:.||.|.|.|:..|..:....::|.|:.|.|     ..:|||:
  Fly  1977 QKEKTQKRKYQRECEDMIESQEAMNREINSLKTKLRRTGGIGLSSSRL 2024

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myh3NP_036736.1 Myosin_N 36..73 CDD:280832 7/37 (19%)
Myosin_head 88..767 CDD:278492 372/737 (50%)
MYSc_Myh3 100..767 CDD:276878 363/725 (50%)
Actin-binding 656..678 15/21 (71%)
Actin-binding 758..772 6/13 (46%)
GrpE 843..>962 CDD:295646 34/118 (29%)
Myosin_tail_1 847..1924 CDD:279860 345/1086 (32%)
RILP-like 962..1095 CDD:304877 46/142 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1260..1289 10/28 (36%)
MIT_CorA-like <1296..>1408 CDD:294313 35/111 (32%)
COG6 1373..>1506 CDD:303003 46/132 (35%)
TMPIT 1739..>1828 CDD:285135 23/88 (26%)
zipNP_523860.2 Myosin_N 80..117 CDD:280832 7/36 (19%)
Myosin_head 133..854 CDD:278492 372/737 (50%)
MYSc_Myh2_insects_mollusks 145..854 CDD:276876 363/725 (50%)
Myosin_tail_1 931..2011 CDD:279860 345/1090 (32%)
Prefoldin 1431..1515 CDD:298833 30/84 (36%)
FAM76 <1847..1926 CDD:292665 23/78 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0161
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D47111at2759
OrthoFinder 1 1.000 - - FOG0000014
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100110
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X58
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.720

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