Sequence 1: | XP_006245904.1 | Gene: | Myh11 / 24582 | RGDID: | 3136 | Length: | 1979 | Species: | Rattus norvegicus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001162991.1 | Gene: | Mhc / 35007 | FlyBaseID: | FBgn0264695 | Length: | 1962 | Species: | Drosophila melanogaster |
Alignment Length: | 1941 | Identity: | 777/1941 - (40%) |
---|---|---|---|
Similarity: | 1182/1941 - (60%) | Gaps: | 35/1941 - (1%) |
- Green bases have known domain annotations that are detailed below.
Rat 9 DDEKFLFV--DKNFINSPMAQADWVAKKLVWVPSEKQGFEAASIKEEKGDEVVVELVENGKKVTV 71
Rat 72 GKDDIQKMNPPKFSKVEDMAELTCLNEASVLHNLRERYFSGLIYTYSGLFCVVVNPYKHLPIYSE 136
Rat 137 KIVDMYKGKKRHEMPPHIYAIADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASS 201
Rat 202 HKGKKDSSITQGPSFAYGELEKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGA 266
Rat 267 NIETYLLEKSRAIRQARDERTFHIFYYLIAGAKEKMRN-DLLLESFNSYTFLSNGFVPIPAAQDD 330
Rat 331 EMFQETLEAMSIMGFSEEEQLAILKVVSSVLQLGNIVFKKERNTDQASMPDNTAAQKVCHLVGIN 395
Rat 396 VTDFTRAILTPRIKVGRDVVQKAQTKEQADFAIEALAKATYERLFRWILSRVNKALDKTHRQGAS 460
Rat 461 FLGILDIAGFEIFEVNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNFIDFGLDLQPC 525
Rat 526 IELIERPNNPPGVLALLDEECWFPKATDKSFVEKLCSEQ-GNHPKFQKPKQLK---DKTEFSIIH 586
Rat 587 YAGKVDYNASAWLTKNMDPLNDNVTSLLNASSDKFVADLWKDVDRIVGLDQMAKMTESSLPSASK 651
Rat 652 TKK-GMFRTVGQLYKEQLGKLMTTLRNTTPNFVRCIIPNHEKRSGKLDAFLVLEQLRCNGVLEGI 715
Rat 716 RICRQGFPNRIVFQEFRQRYEILAANAIPKGFMDGKQACILMIKALELDPNLYRIGQSKIFFRTG 780
Rat 781 VLAHLEEERDLKITDVIMAFQAMCRGYLARKAFTKRQQQLTAMKVIQRNCAAYLKLRNWQWWRLF 845
Rat 846 TKVKPLLQVTRQEEEMQAKEEEMQKIKERQQKAESELKELEQRHTQLAEEKTLLQEQLQAETELY 910
Rat 911 AEAEEMRVRLAAKKQELEEILHEMEARLEEEEDRSQQLQAERKKMAQQMLDLEEQLEEEEAARQK 975
Rat 976 LQLEKVTAEAKIKKLEDDILVMDDQNNKLSKERKLLEERVSDLTTNLAEEEEKAKNLTKLKSKHE 1040
Rat 1041 SMISELEVRLKKEEKSRQELEKLKRKLEGDASDFHEQIADLQAQIAELKMQLAKKEEELQAALAR 1105
Rat 1106 LDEEITQKNNALKKIRELEGHVSDLQEDLDSERAARNKAEKQKRDLGEELEALKTELEDTLDSTA 1170
Rat 1171 TQQELRAKREQEVTMLKKALDEETRSHEAQVQEMRQKHTQAVEELTEQLEQFKRAKANLDKSKQT 1235
Rat 1236 LEKENADLAGELRVLGQAKQEVEHKKKKLEGQLQELQSKCSDGERARTELSDKVHKLQNEVESVT 1300
Rat 1301 GMLNEAEGKAIKLAKEVASLGSQLQDTQELLQEETRQKLNVSTKLRQLEDERNSLQDQLDEEMEA 1365
Rat 1366 KQNLERHVSTLNIQLSDSKKKLQ-DLASTIEVMEEGKKRLQKEMEGLGQQYEEKAAAYDKLEKTK 1429
Rat 1430 NRLQQELDDLVVDLDNQRQLVSNLEKKQKKFDQLLAEEKNISSKYADERDRAEAEAREKETKALS 1494
Rat 1495 LARALEEALEAKEELERTNKMLKAEMEDLVSSKDDVGKNVHELEKSKRALETQMEEMRTQLEELE 1559
Rat 1560 DELQATEDAKLRLEVNMQALKGQFERDLQARDEQNEEKRRQLQRQLHEYETELEDERKQRALAAA 1624
Rat 1625 AKKKLEGDLKDLELQADSAVKGREEAIKQLRKLQAQMKDFQRELDDARASRDEIFATSKENEKKA 1689
Rat 1690 KSLEAELMQLQEDLAAAERARKQADLEKEELAEELASSLSGRN-TLQDEKRRLEARIAQLEEELE 1753
Rat 1754 EEQGNMEAMSDRVRKATLQAEQLSNELVTERSAAQKNESARQQLERQNKELRSKLQEVEGAVKAK 1818
Rat 1819 LKSTVAALEAKIVQLEEQIEQEAREKQAATKLLKQKDKKLKEVLLQVEDERKMVEQYKEQAEKGN 1883
Rat 1884 TKVKQLKRQLEEAEEESQRINANRRKLQRELDEATESNEAMGREVNALKSKLRRGN 1939 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Myh11 | XP_006245904.1 | Myosin_N | 34..71 | CDD:280832 | 15/36 (42%) |
Myosin_head | 87..778 | CDD:278492 | 342/696 (49%) | ||
MYSc_class_II | 99..778 | CDD:276951 | 335/684 (49%) | ||
Myosin_tail_1 | 855..1935 | CDD:279860 | 363/1081 (34%) | ||
FAM76 | <997..1089 | CDD:292665 | 36/91 (40%) | ||
UBAN | 1049..1163 | CDD:301588 | 44/113 (39%) | ||
BAR | <1166..>1295 | CDD:299863 | 40/128 (31%) | ||
Mhc | NP_001162991.1 | Myosin_N | 36..73 | CDD:280832 | 15/37 (41%) |
MYSc | 81..777 | CDD:214580 | 355/715 (50%) | ||
MYSc_Myh1_insects_crustaceans | 100..765 | CDD:276874 | 335/684 (49%) | ||
Myosin_tail_1 | 842..1897 | CDD:279860 | 355/1055 (34%) | ||
V_Alix_like | 1557..1877 | CDD:187408 | 101/320 (32%) | ||
ATP-synt_B | <1671..1771 | CDD:304375 | 29/100 (29%) | ||
TMPIT | 1739..>1825 | CDD:285135 | 27/85 (32%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D47111at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000014 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100110 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X58 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.820 |