DRSC/TRiP Functional Genomics Resources

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Protein Alignment Slco2a1 and Oatp58Db

DIOPT Version :9

Sequence 1:NP_073158.2 Gene:Slco2a1 / 24546 RGDID:3051 Length:644 Species:Rattus norvegicus
Sequence 2:NP_611658.3 Gene:Oatp58Db / 37544 FlyBaseID:FBgn0034715 Length:680 Species:Drosophila melanogaster


Alignment Length:636 Identity:169/636 - (26%)
Similarity:291/636 - (45%) Gaps:99/636 - (15%)


- Green bases have known domain annotations that are detailed below.


  Rat    20 DRRCPRSV--------FSNIKVFVLCHGLLQLCQLLYSAYFKSSLTTIEKRFGLSSSSSGLISSL 76
            |..|..|:        |:...:||:.:|:......:...||..::||:||||.:.:..||||:..
  Fly    32 DTTCGFSIFRGPALQRFATAHMFVIVYGIASCFLAMAFTYFTGTITTMEKRFNIPTKISGLITVG 96

  Rat    77 NEISNATLIIFISYFGSRVNRPRMIGIGGLLLAAGAFVLTLPHF----------LSEPYQYTSTT 131
            |:||......|:||:.||.:|||.:.:|.:::|....::..||.          |:|.|      
  Fly    97 NDISTVFSSAFLSYYASRGHRPRWVALGLIIIAIFCLLMLTPHIFYGPGEEALRLTEEY------ 155

  Rat   132 DGNRSSFQTDLCQKHLPALPPSKCHSTVPDTHKETSSLWG--------LMVVAQLLAGIGTVPIQ 188
             |...||...|   ::.....|.||      .|.::.|..        |..:||.:.|||.....
  Fly   156 -GMSESFGASL---NITEKNDSLCH------EKNSNCLERAGDYTPIVLFFIAQFIGGIGCSLFY 210

  Rat   189 PFGISYVDDFAEPTNSPLYISILFAIAVFGPAFGYLLGSVMLRIFVDYGRVDTATVNLSPGDPRW 253
            ..|:||:||.:..:.:|..:|....:.:.|||.|:.:.|:.||:::|..:....|.|    ||||
  Fly   211 APGLSYMDDNSASSKTPAMLSWSSFLRMLGPAMGFSMVSLCLRLYIDPFKKPLITTN----DPRW 271

  Rat   254 IGAWWLGLLISSGFLIVTSLPFFFFPRAMSRGAERSVTAEETMKTEED-----KSRGSLMDFIKR 313
            :||||:|.::.:..|.::::....||:.|.|...|.:.|:    .|||     :|...::|.:| 
  Fly   272 MGAWWIGWILLTFILTISAVFVGMFPKEMPRAKARRLKAD----GEEDIPLAGRSFQDMLDSLK- 331

  Rat   314 FPRIFLRLLMNPLFMLVVLSQCTFSSVIAGLSTFLNKFLEKQYGATAAYANFLIGAVNLPAAALG 378
                  ||..|.:::..:|:...:.........|..|::|.||..:|:.:....|...|..:|.|
  Fly   332 ------RLASNKVYVYNMLASILYLFGYMPYWIFTPKYIEIQYRQSASTSTMATGTWALGFSAAG 390

  Rat   379 MLFGGILMKRFVFPLQTIPRVAAT------IITISMILCVPLFFMGCSTSAVAEVYPPSTSSSIH 437
            :|..|.::.::    :...|..|.      .:|::.:||..|  :||..|..|      .|.||.
  Fly   391 ILISGYVISKY----KPSARAMAAWNFVVDYLTVAGMLCYVL--VGCDESDRA------NSLSIV 443

  Rat   438 PQQPPACRRDCSCPDSFFHPVCGDNGVEYVSPCHAGCSSTNTSSEASKEPIYLNCSC-------- 494
            | ...:|...|.|...::.|||....:.::|.|||||  |:.:.....:.||..|.|        
  Fly   444 P-TGDSCSASCVCEYVYYAPVCSPENITFISACHAGC--TDKAINELGKTIYTGCRCMGNVSSII 505

  Rat   495 -------VSGGSASAKTGSCPTSCAQLLLPSIFLISFAALIACISHNPLYMMVLRVVNQDEKSFA 552
                   ::..|..|..|:||..|.:..|..:.::.|...:.....:...::.||.|...:|:|:
  Fly   506 SLSNVTSLASQSQIAMDGACPVDCNKQFLIFLAVMCFLKFVGATGRSSNLLLALRCVPSKDKTFS 570

  Rat   553 IGVQFLLMRLLAWLPAPSLYGLLIDSSCVRWNYLCSGRRGACAYYDNDALR 603
            :|...::..:||::|:|.::|.::||.|:.|...||. :|.|..||..:||
  Fly   571 LGFGSMVYSVLAFIPSPIVFGWMLDSYCLVWGKTCSS-KGNCWIYDTKSLR 620

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Slco2a1NP_073158.2 oat 1..630 CDD:273279 169/636 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..20 169/636 (27%)
MFS <166..>425 CDD:119392 71/277 (26%)
KAZAL_SLC21 442..496 CDD:238650 17/68 (25%)
Oatp58DbNP_611658.3 OATP 53..619 CDD:281175 163/612 (27%)
MFS 55..>410 CDD:119392 103/389 (26%)
KAZAL_SLC21 447..499 CDD:238650 17/53 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166339159
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1029129at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.850

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