DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lepr and sdk

DIOPT Version :9

Sequence 1:NP_036728.2 Gene:Lepr / 24536 RGDID:3001 Length:1162 Species:Rattus norvegicus
Sequence 2:NP_001284756.1 Gene:sdk / 31017 FlyBaseID:FBgn0021764 Length:2265 Species:Drosophila melanogaster


Alignment Length:1288 Identity:244/1288 - (18%)
Similarity:423/1288 - (32%) Gaps:456/1288 - (35%)


- Green bases have known domain annotations that are detailed below.


  Rat    38 APPSTTDDSFLSPAGVPNNTSSL--KGASEAL---------VEAKFNSTGIYVSELSKTIFH--- 88
            ||..||.         |:::.|:  :|:::.|         ...::...|:.|.:.|.:.|:   
  Fly    71 APRFTTH---------PSSSGSIVSEGSTKILQCHALGYPQPTYRWLKDGVPVGDFSSSQFYRFH 126

  Rat    89 -----------CCFGNEQGQNCS-------ALTG----NTEGKTLASVVKPLVFRQ--------L 123
                       |...|:.|...|       |..|    .|||:.......|.:|..        .
  Fly   127 STRREDAGSYQCIARNDAGSIFSEKSDVVVAYMGIFENTTEGRLTVISGHPAIFDMPPIESIPVP 191

  Rat   124 GVNWDIECW-MKGDLTLFICHMEPLL-----KNPFKNYDSK--------------VHLLYDLPEV 168
            .|.|..|.. :..|:.....|...|:     :|..|.|.:|              |||.......
  Fly   192 SVMWQSEDGPLNYDIKYAFTHANQLIILSADENDRKGYRAKAINTQLGKEESSAFVHLNVSGDPY 256

  Rat   169 IDDLPLPPLKDSFQTVQCNCSVQECEC-------H----------VPVPRAKVNYAL-------L 209
            |:..|...::.....|:....|.|.:|       |          :.|..|.|.:.|       |
  Fly   257 IEVAPEIIVRPQDVKVKVGTGVVELQCIANARPLHELETLWLKDGLAVETAGVRHTLNDPWNRTL 321

  Rat   210 MYLEITSA-----------------GVSFQSPLMSLQPMLVVKPDPPLGLRMEVTDD--GNLKIS 255
            ..|:..|:                 .||..:.|..|:|.|...|     :|.|...:  |.::::
  Fly   322 ALLQANSSHSGEYTCQVRLRSGGYPAVSASARLQILEPPLFFTP-----MRAETFGEFGGQVQLT 381

  Rat   256 WDSQTKAPFPLQYQVKYLENSTIVREAAE-----IVSDTSLLVDSVLPGSSYEVQVRSKRLDGSG 315
            .| ....|.|   |||:..|:..|....|     :.:|.:|::..::...:...|..:....|..
  Fly   382 CD-VVGEPTP---QVKWFRNAESVDAHIESGRYTLNTDNTLVIKKLILDDAAMFQCLAINEAGEN 442

  Rat   316 VWSDW---------------SLPQL----------------------------FTTQDVMYFPPK 337
            ..|.|               :.|::                            |.:..:|..||:
  Fly   443 SASTWLRVKTKTAKNRVKRLAQPRILRVRASHAGLGSEKGSESGSSDRRKEFRFASAPIMELPPQ 507

  Rat   338 ILTSV-GSNASFCCIYKNENQTISS--KQIVWWMNLAEKIPETQYNTVSDHISKVTFSNLKATRP 399
            .:|:: |.:|:..|      :.:.|  ..|.|..|      |||...:|..:..:...:|..:..
  Fly   508 NVTALDGKDATISC------RAVGSPNPNITWIYN------ETQLVDISSRVQILESGDLLISNI 560

  Rat   400 RGKFTYDA-VYCCNEQACHHRYAELYVIDVNINISCETDGYLTKMTCRWSPSTIQSLVGSTVQLR 463
            |   :.|| :|.|              :..|...|.:.:.||:.:.   ....||..|.:||.|.
  Fly   561 R---SVDAGLYIC--------------VRANEAGSVKGEAYLSVLV---RTQIIQPPVDTTVLLG 605

  Rat   464 YHRRSLYC--PDNPSI-------------RPTSELKNCVLQTDGFYECVFQPIFLLSGYTMWIRI 513
            . ..:|.|  ..:||:             .|.|..:...:|.||..|            ...:|.
  Fly   606 L-TATLQCKVSSDPSVPYNIDWYREGQSSTPISNSQRIGVQADGQLE------------IQAVRA 657

  Rat   514 NHSLGSLDSPPTCVLPD-----------SVVK-PLPPSNVKAE-------ITINTGLLKVSWEKP 559
            : .:||.    .||:..           ||:: |.||||||.|       .:||     ||| .|
  Fly   658 S-DVGSY----ACVVTSPGGNETRAARLSVIELPFPPSNVKVERLPEPQQRSIN-----VSW-TP 711

  Rat   560 VFPENNLQFQI-RYGLNGKEI-----------QWKTHEVFDAKSKSASLPVSDLCAVYVVQVRCR 612
            .|..|:   .| ::.:..:|:           .|.| |:.:..:....:.:.:|.|..|.|.|..
  Fly   712 GFDGNS---PISKFIIQRREVSELGPVPDPLLNWIT-ELSNVSADQRWILLENLKAATVYQFRVS 772

  Rat   613 RLDGLGYWSNWSSPAYTLVMDVKVPMRGPEFW----RIMDGDITKKERNVTLLWKPLMKNDSLCS 673
            .::.:|..|. |.|:..:.:..:.|...|..:    |.|...||:        |:|.::......
  Fly   773 AVNRVGEGSP-SEPSNVVELPQEAPSGPPVGFVGSARSMSEIITQ--------WQPPLEEHRNGQ 828

  Rat   674 VRRYVVKHRT--AHNGTWS-QDVGNQTNLTFL------WAESAHTVTVLAINSIGASLVNFNLTF 729
            :..|::::|.  .:|..|| |::.|:....||      |.:  :.|.:.|.|::|..:....   
  Fly   829 ILGYILRYRLFGYNNVPWSYQNITNEAQRNFLIQELITWKD--YIVQIAAYNNMGVGVYTEG--- 888

  Rat   730 SWPMSKVNAVQSLSAYP--------LSSSCVILSWTLSPNDYSLL-----YLVIEWKNLNDDDGM 781
                ||:...:.:...|        ::|:.....|| .||...:.     |.:..|:        
  Fly   889 ----SKIKTKEGVPEAPPTNVKVEAINSTAARCRWT-PPNPQQINGINQGYKIQAWQ-------- 940

  Rat   782 KWLRIPSNVNKYYIHDNFIPIEKYQFSLYPVFMEGVGKPKIING----FTKDDIAKQQNDAGLYV 842
                      :..|...:..||:...::.|..::.:.:...|.|    ||:.:|:         |
  Fly   941 ----------RRLIDGEWRDIERRMKTVPPSLIDPLAEQTAILGGLEKFTEYNIS---------V 986

  Rat   843 IVPIIISSCVLLLGTLLISHQRMKKLFWDDVPNPKNCSWAQGLNFQKPETFEHLFTKHAESVIFG 907
            :       |....|..:.|.| :..:..||||:.     ..||:|                    
  Fly   987 L-------CFTDPGDGVASSQ-VAVMTMDDVPDE-----VTGLHF-------------------- 1018

  Rat   908 PLLLEPEPVSEEISVDTAWKNKDEMVPAAMVSLLLT----------TPDSTRGSICISDQCNSAN 962
                  :.||:. ||...|      .|....:.:||          .||:.:          |.|
  Fly  1019 ------DDVSDR-SVKVLW------APPRASNGILTGYTVRYQVKDRPDTLK----------SFN 1060

  Rat   963 FSGAQSTQGTCEDECQSQPSVKY-----------------ATLVSNVKPVETDEEQGAIHSSVSQ 1010
            .: |..|:.|..   |.|.:..|                 ||:.|.|:||..........|::..
  Fly  1061 LT-ADDTELTVN---QLQATTHYWFEIVAWTRVGSGIPKTATIQSGVEPVLPHAPTALALSNIEA 1121

  Rat  1011 -CIARKHSPLRQSFSS-SSWEIEAQA------FFLLSDHPPNVISPQLSFSGL 1055
             .:..:.:|.....|| :.|::|.|.      |.:...:.|:  :..|:.:||
  Fly  1122 FSVVLQFTPGFDGNSSITKWKVEGQTARNMTWFTICEINDPD--AETLTVTGL 1172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LeprNP_036728.2 ObR_Ig 126..231 CDD:408372 30/165 (18%)
FN3 236..328 CDD:238020 21/141 (15%)
Lep_receptor_Ig 327..418 CDD:399379 21/94 (22%)
ObR_Ig 429..531 CDD:408372 25/127 (20%)
Leptin-binding. /evidence=ECO:0000250|UniProtKB:P48357 465..482 5/31 (16%)
FN3 535..625 CDD:238020 28/108 (26%)
WSXWS motif 620..624 1/3 (33%)
FN3 738..818 CDD:214495 12/92 (13%)
Box 1 motif 869..877 4/7 (57%)
Required for JAK2 activation. /evidence=ECO:0000250|UniProtKB:P48356 891..896 0/4 (0%)
Required for STAT3 phosphorylation. /evidence=ECO:0000250|UniProtKB:P48356 896..904 0/7 (0%)
sdkNP_001284756.1 Ig 71..157 CDD:299845 16/94 (17%)
I-set 72..150 CDD:254352 14/86 (16%)
Ig 172..245 CDD:299845 12/72 (17%)
IG_like 280..356 CDD:214653 13/75 (17%)
Ig 280..343 CDD:299845 10/62 (16%)
IG_like 375..450 CDD:214653 16/78 (21%)
Ig 378..447 CDD:143165 14/72 (19%)
Ig 506..587 CDD:299845 23/109 (21%)
IG_like 506..587 CDD:214653 23/109 (21%)
I-set 592..682 CDD:254352 21/107 (20%)
Ig 595..682 CDD:299845 20/104 (19%)
FN3 686..789 CDD:238020 30/113 (27%)
FN3 798..893 CDD:238020 23/111 (21%)
FN3 901..1005 CDD:238020 22/139 (16%)
fn3 1011..1094 CDD:278470 21/134 (16%)
FN3 1108..1202 CDD:238020 12/67 (18%)
FN3 1210..1308 CDD:238020
fn3 1317..1402 CDD:278470
FN3 1415..1507 CDD:238020
FN3 1513..1608 CDD:238020
fn3 1617..1708 CDD:278470
FN3 1722..1823 CDD:238020
FN3 1828..1920 CDD:238020
FN3 1927..2016 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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