DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jun and Jra

DIOPT Version :9

Sequence 1:NP_068607.1 Gene:Jun / 24516 RGDID:2943 Length:334 Species:Rattus norvegicus
Sequence 2:NP_001260844.1 Gene:Jra / 36057 FlyBaseID:FBgn0001291 Length:372 Species:Drosophila melanogaster


Alignment Length:312 Identity:100/312 - (32%)
Similarity:147/312 - (47%) Gaps:80/312 - (25%)


- Green bases have known domain annotations that are detailed below.


  Rat    27 GYSNPKILK-QSMTLNLADPVGNLKP---HLRAKNSD--------LLTSPDVGLLKLASPELERL 79
            |...|..|. ||..||.:.|..|.:|   .|.:|::.        ::.|||:....:.:|:||::
  Fly    34 GEEGPMSLDFQSPNLNTSTPNPNKRPGSLDLNSKSAKNKRIFAPLVINSPDLSSKTVNTPDLEKI 98

  Rat    80 IIQSSNGHITTTPTPTQFLCPK--NVTDEQEGFAEGFVRALAELHSQN-TLPSVTSAAQPVSGAG 141
            ::   :.::..||.|.:....|  .||.||..|..||..||..||:.: ..||..|||...:. .
  Fly    99 LL---SNNLMQTPQPGKVFPTKAGPVTVEQLDFGRGFEEALHNLHTNSQAFPSANSAANSAAN-N 159

  Rat   142 MVAPAVASVAGAGGGGGYSASLHSEPPVYANLSNFNPGALSSGGGAPSYGATGLAFPSQPQQQQQ 206
            ..|.|:.:|.....||.::         |.|::.                               
  Fly   160 TTAAAMTAVNNGISGGTFT---------YTNMTE------------------------------- 184

  Rat   207 PPQPPHHLPQQIPVQHPRLQALKEEPQTVPEMPGETPPLSPIDMESQERIKAERKRMRNRIAASK 271
                             ....:|:||..    ...:|.::|||||:||:||.||||.|||:||||
  Fly   185 -----------------GFSVIKDEPVN----QASSPTVNPIDMEAQEKIKLERKRQRNRVAASK 228

  Rat   272 CRKRKLERIARLEEKVKTLKAQNSELASTANMLREQVAQLKQKVMNHVNSGC 323
            |||||||||::||::||.||.:|.:|||....|::.||||||:||.|:.:||
  Fly   229 CRKRKLERISKLEDRVKVLKGENVDLASIVKNLKDHVAQLKQQVMEHIAAGC 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JunNP_068607.1 Jun 5..244 CDD:281890 48/231 (21%)
Interaction with PAGE4. /evidence=ECO:0000250|UniProtKB:P05412 150..226 5/75 (7%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 184..217 0/32 (0%)
Basic motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU00978 255..282 22/26 (85%)
bZIP_Jun 257..317 CDD:269844 39/59 (66%)
coiled coil 258..309 CDD:269844 31/50 (62%)
Leucine-zipper. /evidence=ECO:0000255|PROSITE-ProRule:PRU00978 283..311 13/27 (48%)
JraNP_001260844.1 Jun <76..>144 CDD:281890 21/70 (30%)
bZIP_Jun 214..274 CDD:269844 39/59 (66%)
coiled coil 215..266 CDD:269844 31/50 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166343680
Domainoid 1 1.000 89 1.000 Domainoid score I7653
eggNOG 1 0.900 - - E1_KOG0837
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 136 1.000 Inparanoid score I4456
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1090460at2759
OrthoFinder 1 1.000 - - FOG0001331
OrthoInspector 1 1.000 - - otm45162
orthoMCL 1 0.900 - - OOG6_106880
Panther 1 1.100 - - O PTHR11462
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1044
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.760

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