Sequence 1: | NP_062001.2 | Gene: | Ina / 24503 | RGDID: | 2911 | Length: | 506 | Species: | Rattus norvegicus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001260974.1 | Gene: | LamC / 36615 | FlyBaseID: | FBgn0010397 | Length: | 640 | Species: | Drosophila melanogaster |
Alignment Length: | 513 | Identity: | 138/513 - (26%) |
---|---|---|---|
Similarity: | 232/513 - (45%) | Gaps: | 98/513 - (19%) |
- Green bases have known domain annotations that are detailed below.
Rat 44 SRSNVASTA----ACSSASSLGLGLAYRRLPASDGLDLSQAAARTNEYKIIRTNEKEQLQGLNDR 104
Rat 105 FAVFIEKVHQLETQNRALEAELAALRQR-HAEPSRVGELFQRELRELRAQLEEASSARAQALLER 168
Rat 169 DGLAEEVQRLRARCEEESRGREGAE---------------------------------------- 193
Rat 194 --RALKAQQRDVDGATLARLDLEKKVESLLDELAFVRQVHDEEVAELLATLQASSQAAAEVDVAV 256
Rat 257 AK---PDLTSALREIRAQYESLAAKNLQSAEEWYKSKFANLNEQAARSTEAIRASREEIHEYRRQ 318
Rat 319 LQARTIEIEGLRGANESLERQILELEERHSAEVAGYQDSIGQLESDLRNTKSEMARHLREYQDLL 383
Rat 384 NVKMALDIEIAAYRKLLEGEETRF---------STSGLSISGLNPLPNPSYLLPPRILSSTTSKV 439
Rat 440 SSAGLSLKKEEEEEEEEEEEGASKEVTKKTSKVGESFEETLEE-TVVSTKKTEKSTIE 496 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ina | NP_062001.2 | Head | 1..87 | 9/46 (20%) | |
Filament_head | 10..92 | CDD:282575 | 9/51 (18%) | ||
Coil 1A | 88..129 | 18/40 (45%) | |||
Filament | 93..406 | CDD:278467 | 106/358 (30%) | ||
Linker 1 | 130..142 | 2/12 (17%) | |||
Coil 1B | 143..238 | 32/136 (24%) | |||
Linker 2 | 239..262 | 3/25 (12%) | |||
Coil 2 | 263..408 | 51/153 (33%) | |||
LamC | NP_001260974.1 | Filament | 45..401 | CDD:278467 | 106/358 (30%) |
ATP-synt_B | <67..>142 | CDD:304375 | 19/74 (26%) | ||
MreC | <178..>224 | CDD:302802 | 15/45 (33%) | ||
LTD | 473..574 | CDD:279300 | 3/12 (25%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |