DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ibsp and Su(var)2-HP2

DIOPT Version :9

Sequence 1:NP_036719.2 Gene:Ibsp / 24477 RGDID:2855 Length:319 Species:Rattus norvegicus
Sequence 2:NP_610972.2 Gene:Su(var)2-HP2 / 36621 FlyBaseID:FBgn0026427 Length:3257 Species:Drosophila melanogaster


Alignment Length:265 Identity:62/265 - (23%)
Similarity:97/265 - (36%) Gaps:91/265 - (34%)


- Green bases have known domain annotations that are detailed below.


  Rat    66 SSEENGDGDSSEE-------------EGEE----EETSNEEENN---EDSEGNED--QEAEAENA 108
            ||.::.|.|..:|             :||:    |.|..|..||   ||....::  ::.|.:||
  Fly  1751 SSNKSTDSDVLQETKDELSNSLINATQGEDTPIKELTEEEVPNNKTVEDESKKQEILKDLEPDNA 1815

  Rat   109 TLSGVTASYGVETTADAGK--------------------------LELAALQLPKKA------GD 141
            .|...|||     ||.|.:                          .|||...:|..:      .|
  Fly  1816 ALEEDTAS-----TAKAAEEMDLYIKEKSNVKSVLAEPETDVTDDEELAQSPIPNSSETTSVTDD 1875

  Rat   142 AE-------GKAPKMKESDEEEEEEEEEENENEEAE---VDENEQVVNGTSTNSTEVDGGNGPSG 196
            .|       .::.:.:|:|..:.:|..:..:.::.|   ..:.|||.........||:  ..|| 
  Fly  1876 PEPSTSSVVKRSLRKREADSSQPDEAAKRKQRQDVEKSLTGKKEQVKPARRRQLAEVE--ERPS- 1937

  Rat   197 GDNGEEAEEASVTEAGAEGTTAGARELTSYGTTTAVLLNGFQQTTPP-----PEAYGTTSPPARK 256
                   .:.|.||:.|:.|..| :.::..|..|.:     ..||.|     .|| .:|||.|||
  Fly  1938 -------LKRSKTESEAKSTVQG-KYISIIGNETIM-----SSTTAPIRETNREA-ASTSPSARK 1988

  Rat   257 SSTVE 261
            |:..|
  Fly  1989 SAVQE 1993

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IbspNP_036719.2 BSP_II 17..316 CDD:283165 62/265 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 59..116 19/71 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 135..224 20/104 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 237..263 13/30 (43%)
Cell attachment site 288..290
Su(var)2-HP2NP_610972.2 MDN1 <596..845 CDD:227596
PTZ00449 <739..1091 CDD:185628
PTZ00108 <1132..1374 CDD:240271
PTZ00121 <1720..>2291 CDD:173412 62/265 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1181
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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