Protein Alignment Hoxc8 and Antp

DIOPT Version :9

• Sequence 1: NP_001170797.2
• Gene: Hoxc8 / 24460
• RGDID: 2821
• Length: 242
• Species: Rattus norvegicus
• Sequence 2: NP_996167.1
• Gene: Antp / 40835
• FlyBaseID: FBgn0260642
• Length: 378
• Species: Drosophila melanogaster
• Alignment Length: 219
• Identity: 86/219 - (39%)
• Similarity: 110/219 - (50%)
• Gaps: 32/219 - (14%)

  Rat    23 YYDCRFPQSVGRSHALVYGPGGSAPGF--QHASHHV---QDFFHHGTSGISNSGY---------- 72
            |..|:...:||   .|...|.|.:|..  |.:.||:   ....||.....:..||
  Fly   159 YASCKLQAAVG---GLGMVPEGGSPPLVDQMSGHHMNAQMTLPHHMGHPQAQLGYTDVGVPDVTE 220

  Rat    73 -QQNPCSLSCHGDASKFYGYEALPRQSLYGAQQEASVVQ-YP--DCKSSANTNSSEGQGHLNQNS 133
             .||..::..:...|......|.|:..::..|....:.| :|  ....|.|.||       ..:.
  Fly   221 VHQNHHNMGMYQQQSGVPPVGAPPQGMMHQGQGPPQMHQGHPGQHTPPSQNPNS-------QSSG 278

  Rat   134 SPSLMFPWMRPH---APGRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKI 195
            .||.::||||..   ...|:.|||||:|||||||||||.||.||||:||||::|||.|||||:||
  Fly   279 MPSPLYPWMRSQFGKCQERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKI 343

  Rat   196 WFQNRRMKWKKENNKDKLPGARDE 219
            |||||||||||||.....||:..|
  Fly   344 WFQNRRMKWKKENKTKGEPGSGGE 367

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hoxc8	NP_001170797.2	Homeobox	153..206	CDD:395001	44/52 (85%)
Antp	NP_996167.1	KLF1_2_4_N	<161..306	CDD:425360	38/154 (25%)
		Homeobox	301..354	CDD:395001	44/52 (85%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X14
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	5	4.810