Sequence 1: | NP_001103354.1 | Gene: | Hoxc4 / 24459 | RGDID: | 1586210 | Length: | 264 | Species: | Rattus norvegicus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_477498.1 | Gene: | ftz / 40834 | FlyBaseID: | FBgn0001077 | Length: | 410 | Species: | Drosophila melanogaster |
Alignment Length: | 362 | Identity: | 106/362 - (29%) |
---|---|---|---|
Similarity: | 134/362 - (37%) | Gaps: | 132/362 - (36%) |
- Green bases have known domain annotations that are detailed below.
Rat 6 YLMDSNYIDPKFPPCEEYSQNSYIPEHSPEYYGRTRESGFQHHHQELYPP-----PPPRPSYPER 65
Rat 66 QYSCTSL-----QGPGNSRA--HGPAQAGHHHPE---------KSQP------LCEPAP------ 102
Rat 103 ---------------------------LSGASASPSPAPPACSQP---------APDHPSSAASK 131
Rat 132 QPIVYPWMKKIHVSTVNPNYNGG---------------EPKRSRTAYTRQQVLELEKEFHYNRYL 181
Rat 182 TRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKDHRLPNTK-------VRSAPPAGA-------AP 232
Rat 233 ST---------LSAATPGTSEDHSQS----ATPPEQQ 256 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Hoxc4 | NP_001103354.1 | Homeobox | 159..213 | CDD:395001 | 41/53 (77%) |
ftz | NP_477498.1 | FTZ | 1..248 | CDD:281812 | 44/227 (19%) |
Homeobox | 257..310 | CDD:278475 | 41/52 (79%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG0489 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000007 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.810 |