Sequence 1: | NP_001103354.1 | Gene: | Hoxc4 / 24459 | RGDID: | 1586210 | Length: | 264 | Species: | Rattus norvegicus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001368995.1 | Gene: | Scr / 40833 | FlyBaseID: | FBgn0003339 | Length: | 564 | Species: | Drosophila melanogaster |
Alignment Length: | 306 | Identity: | 97/306 - (31%) |
---|---|---|---|
Similarity: | 129/306 - (42%) | Gaps: | 101/306 - (33%) |
- Green bases have known domain annotations that are detailed below.
Rat 15 PKFPPCEEYSQNSYIPEHSPEYYGRT-------------RESGFQHHH----------QELYPPP 56
Rat 57 PPRPSYPERQ--YSCTSLQGP---------GNSRAHGPAQAGHHHPEKSQPLCEPAPLSGASASP 110
Rat 111 SPAPPAC-----------------------------------------------------SQPAP 122
Rat 123 DHPSSAASKQ---------PIVYPWMKKIHV--STVNPNYNGGEPKRSRTAYTRQQVLELEKEFH 176
Rat 177 YNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKDHRLPNTKV 222 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Hoxc4 | NP_001103354.1 | Homeobox | 159..213 | CDD:395001 | 46/53 (87%) |
Scr | NP_001368995.1 | Homeobox | 328..381 | CDD:395001 | 46/52 (88%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG0489 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000007 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X14 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.810 |