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Protein Alignment Hoxc4 and zen2
DIOPT Version :9
Sequence 1: | NP_001103354.1 |
Gene: | Hoxc4 / 24459 |
RGDID: | 1586210 |
Length: | 264 |
Species: | Rattus norvegicus |
Sequence 2: | NP_476794.1 |
Gene: | zen2 / 40827 |
FlyBaseID: | FBgn0004054 |
Length: | 252 |
Species: | Drosophila melanogaster |
Alignment Length: | 157 |
Identity: | 54/157 - (34%) |
Similarity: | 73/157 - (46%) |
Gaps: | 45/157 - (28%) |
- Green bases have known domain annotations that are detailed below.
Rat 134 IVYPWMK-KIHVSTVNPNYNGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSE 197
::||.:: .:..:......:..:.||||||::..|::|||:|||.|:||.|.|||||:..|.|:|
Fly 20 MMYPCVELNVEAAPTATTRSSEKSKRSRTAFSSLQLIELEREFHLNKYLARTRRIEISQRLALTE 84
Rat 198 RQIKIWFQNRRMKWKKDH----------------------------------RLPNTKVRSAPPA 228
||:||||||||||.||.. |..||.|.:||
Fly 85 RQVKIWFQNRRMKLKKSTNRKGAIGALTTSIPLSSQSSEDLQKDDQIVERLLRYANTNVETAP-- 147
Rat 229 GAAPSTLSAATPGTSEDHSQSATPPEQ 255
|.....|..|: ...|||.|
Fly 148 ------LRQVDHGVLEE--GQITPPYQ 166
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E2759_KOG0489 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000007 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X14 |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
4 | 3.900 |
|
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