Protein Alignment Hoxb8 and Ubx

DIOPT Version :9

• Sequence 1: NP_001178578.1
• Gene: Hoxb8 / 24457
• RGDID: 1586211
• Length: 243
• Species: Rattus norvegicus
• Sequence 2: NP_536752.1
• Gene: Ubx / 42034
• FlyBaseID: FBgn0003944
• Length: 389
• Species: Drosophila melanogaster
• Alignment Length: 271
• Identity: 87/271 - (32%)
• Similarity: 112/271 - (41%)
• Gaps: 87/271 - (32%)

  Rat    16 GESLRPNYYDC-------GFAQDLGGRPTVVYGPSSGGSFQHPSQIQEFYHGPSSLSTAPYQQNP 73
            |..:||:  .|       |:....||.|....|.|:||:
  Fly   150 GMPVRPS--ACTPDSRVGGYLDTSGGSPVSHRGGSAGGN-------------------------- 186

  Rat    74 CAVACHGDPGNFYGYDPLQRQSLFGAQDPDLVQYADCKLAAASGLGEEAEGSEQSPSPTQLFPWM 138
              |:..|..||..|.     ||..|.........|:|.::.|:.....|....|:.:.| .:|||
  Fly   187 --VSVSGGNGNAGGV-----QSGVGVAGAGTAWNANCTISGAAAQTAAASSLHQASNHT-FYPWM 243

  Rat   139 R--------------------------------PQAAAG------------RRRGRQTYSRYQTL 159
            .                                .::.||            ||||||||:|||||
  Fly   244 AIAGECPEDPTKSKIRSDLTQYGGISTDMGKRYSESLAGSLLPDWLGTNGLRRRGRQTYTRYQTL 308

  Rat   160 ELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKFPSSKCEQEELEKEK 224
            ||||||..|.||||:||||::|||.|||||:||||||||||.|||....|..:.:.:|.:.:|..
  Fly   309 ELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKEIQAIKELNEQEKQAQAQKAA 373

  Rat   225 LERAPETAEQG 235
            ...|...|.||
  Fly   374 AAAAAAAAVQG 384

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hoxb8	NP_001178578.1	Homeobox	150..203	CDD:395001	42/52 (81%)
Ubx	NP_536752.1	Homeobox	299..352	CDD:395001	42/52 (81%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.810