Sequence 1: | NP_001257531.1 | Gene: | Grin1 / 24408 | RGDID: | 2736 | Length: | 959 | Species: | Rattus norvegicus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_727328.1 | Gene: | Ir8a / 31867 | FlyBaseID: | FBgn0052704 | Length: | 936 | Species: | Drosophila melanogaster |
Alignment Length: | 912 | Identity: | 195/912 - (21%) |
---|---|---|---|
Similarity: | 340/912 - (37%) | Gaps: | 272/912 - (29%) |
- Green bases have known domain annotations that are detailed below.
Rat 217 QFDPGTKNVTALLMEARELEA---------RVIILSASED--------DAATVYRAAAMLNMT-- 262
Rat 263 ------------GSGYVWLVGER------EISGNALRYAPDGIIGLQLINGKNESAHISDAVGVV 309
Rat 310 AQAV-----HELLEKENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYADGVTGRVE--------- 360
Rat 361 -----FNEDGDRKFANY-----------------------------SIMNLQNRKLVQV--GIYN 389
Rat 390 GTHVIP-------NDRKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFV-YVKP------------ 434
Rat 435 -------TMSDGTCKEEFTVNGD------------------PVKKVICTGPNDTSPGS------- 467
Rat 468 ------PRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGEL 526
Rat 527 LSGQADMIVAPLTINNERAQYIEFSKPFKYQ-GLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLS 590
Rat 591 VHVVAVMLYLLDRFSPFGRFKVNSEEEEEDA-------LTLSSAMWFSWGVLLNSGIGEGAPRSF 648
Rat 649 SARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIY 713
Rat 714 F-RRQVELSTMYRHME--------------------KHNYESAAEAI---QAVRD---------- 744
Rat 745 --NKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLSILKSHENGFME 807
Rat 808 DLD-KTWVRYQECDSRSNAP--------ATLTFENMAGVFMLVAGGIVAGIFLIFIEIAYKRHKD 863
Rat 864 ARRKQMQLAFAAV-------------------------NVWRKNL--QDRKSGRAEPDPK-KKAT 900
Rat 901 FR 902 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Grin1 | NP_001257531.1 | PBP1_iGluR_NMDA_NR1 | 25..404 | CDD:380602 | 48/280 (17%) |
PBP2_iGluR_NMDA_Nr1 | 416..820 | CDD:270437 | 121/499 (24%) | ||
CaM_bdg_C0 | 856..884 | CDD:402271 | 6/54 (11%) | ||
Ir8a | NP_727328.1 | PBP2_iGluR_putative | 383..786 | CDD:270435 | 110/425 (26%) |
Lig_chan | 520..818 | CDD:278489 | 80/314 (25%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000021 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.910 |