DRSC/TRiP Functional Genomics Resources

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Protein Alignment Got1 and Got1

DIOPT Version :10

Sequence 1:NP_036703.2 Gene:Got1 / 24401 RGDID:2721 Length:413 Species:Rattus norvegicus
Sequence 2:NP_725534.1 Gene:Got1 / 36782 FlyBaseID:FBgn0001124 Length:437 Species:Drosophila melanogaster


Alignment Length:406 Identity:229/406 - (56%)
Similarity:293/406 - (72%) Gaps:5/406 - (1%)


- Green bases have known domain annotations that are detailed below.


  Rat     5 SFFAQVPQAPPVLVFKLIADFRDDPDPRKVNLGVGAYRTDDSQPWVLPVVRKVEQKIANDHSLNH 69
            |.:|.||:.|.:.||.|...|:||.:|.||||.|||||||...|||||||||.|..||:|..:||
  Fly    23 SIYADVPKGPAIEVFALTQAFKDDSNPNKVNLSVGAYRTDAGVPWVLPVVRKTEISIASDEQVNH 87

  Rat    70 EYLPILGLAEFRSCASQLVLGDNSPALRENRVGGVQSLGGTGALRIGADFLGRWYNGTDNKNTPV 134
            ||||:.||..|.:.|::||||.:|||::|||..|||::.||||||:.||||    :...|:|. |
  Fly    88 EYLPVTGLETFTNAATELVLGADSPAIKENRAFGVQTISGTGALRVAADFL----HTQLNRNV-V 147

  Rat   135 YVSSPTWENHNGVFSAAGFKDIRSYRYWDAEKRGLDLQGFLNDLENAPEFSIFVLHACAHNPTGT 199
            |.|:||||||:.:|..|||..::||||||..||.||.:..|.||.:||..::.:||||||||||.
  Fly   148 YYSNPTWENHHKIFCDAGFTTVKSYRYWDQNKRELDFKNMLADLNDAPPGAVIILHACAHNPTGI 212

  Rat   200 DPTEEEWKQIAAVMKRRFLFPFFDSAYQGFASGDLEKDAWAIRYFVSEGFELFCAQSFSKNFGLY 264
            |||:|:|.::|.:|:::.|||.||||||||||||.::||||.||||..|||||..|||:||||||
  Fly   213 DPTQEQWTELADLMEKKKLFPLFDSAYQGFASGDPDRDAWAARYFVQRGFELFICQSFAKNFGLY 277

  Rat   265 NERVGNLTVVGKEHDSVLRVLSQMEKIVRITWSNPPAQGARIVATTLSNPELFKEWKGNVKTMAD 329
            .||.|||.||.|...:...|.||:..::|..:|||||.|||||:..|:.|||.|||..:::.|:.
  Fly   278 CERTGNLAVVQKNGATKAAVHSQLTLLIRGQYSNPPAYGARIVSKVLNTPELRKEWMASIQAMSS 342

  Rat   330 RILTMRSELRARLEALKTPGTWSHITEQIGMFSFTGLNPKQVEYLVNEKHIYLMPSGRINMCGLT 394
            ||..||:.||.:|.||.|||||.||..||||||:||||...|..|:::.||||:.:|||:|.||.
  Fly   343 RIREMRTALRDKLVALGTPGTWDHIVNQIGMFSYTGLNESHVRVLIDQYHIYLLKTGRISMSGLN 407

  Rat   395 TKNLDYVATSINEAVT 410
            ..|::|||.:|:.|||
  Fly   408 KGNVEYVAKAIHAAVT 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Got1NP_036703.2 PTZ00376 5..411 CDD:240390 229/406 (56%)
Got1NP_725534.1 PTZ00376 21..423 CDD:240390 225/399 (56%)

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