DRSC/TRiP Functional Genomics Resources

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Protein Alignment Stard13 and cv-c

DIOPT Version :9

Sequence 1:NP_001156965.1 Gene:Stard13 / 243362 MGIID:2385331 Length:1132 Species:Mus musculus
Sequence 2:NP_001097786.1 Gene:cv-c / 41749 FlyBaseID:FBgn0285955 Length:2351 Species:Drosophila melanogaster


Alignment Length:1202 Identity:401/1202 - (33%)
Similarity:594/1202 - (49%) Gaps:280/1202 - (23%)


- Green bases have known domain annotations that are detailed below.


Mouse    18 PLTPESQEMYLRFDQ-TARRSPYRMSRILARHHLVTKIQQEIEAKEACDWLRAAGFPQYAQLYED 81
            |:..:.:||..|||. .|:....|.||..:..:|.     ||||.|||.||||||||||||:|||
  Fly  1343 PMLLKEREMSRRFDNFEAQHLTLRYSRSQSDRYLA-----EIEAVEACKWLRAAGFPQYAQMYED 1402

Mouse    82 SQFPINIAAVKKDHDFLERDLVEPLCRRLNTLNKCASMRLDVNF-----QRKKGDDSDEEDLCIS 141
            .||||::..|.|||..||.|.::.|.|||..||:||:||||.:.     |:|  ::||:|:..:|
  Fly  1403 HQFPIDLNNVAKDHTNLENDQLQSLYRRLCVLNRCATMRLDQSHKPQTPQQK--EESDDENFALS 1465

Mouse   142 NKWTFQRTSRRWSRVDDLHTLFPVADRNGSPGGPRMRNTASSESVLTDLSEPEVCSIHSESSGGS 206
            ..||||...|||||:.::.                           .:|..|.:.|::.|.:..|
  Fly  1466 EHWTFQPHIRRWSRIGEMG---------------------------LELPPPGLLSLNVEKTESS 1503

Mouse   207 DSRSQSGHHSADSTHALEATLVS-------------SSLPQSTREG-LNQSFHPKNEKPTRTRAK 257
            ...|.......|..   ..|||:             |||.:.:..| |.:|    ..:..:.:||
  Fly  1504 SKESSPDRFEEDGA---GITLVTPGCSKAGGIPNDGSSLGEGSDSGRLRRS----GSERIKDQAK 1561

Mouse   258 SFLKRMDTLRVKGALGRHKGPGRTGGLVISRPVLQQEPESFKTMQCVQIPNGDLQTSPPAACRKG 322
            :.|:|:::::.:    |.|...|. .:|||.|.:.                 ||           
  Fly  1562 ALLRRVESIKSR----RRKRQNRE-NVVISGPTVL-----------------DL----------- 1593

Mouse   323 LPCSSKSSGESSPLENSSTV-STPCMKERKCHHEANKRGGMYLEDLDVLAGTALPDTSDQNHMHG 386
                 ...|:.|.|.....| |||                              |..|..:.|| 
  Fly  1594 -----SQFGQRSSLRKPDAVYSTP------------------------------PSPSALSPMH- 1622

Mouse   387 FHSQENLVVHIPKDHKPGTFPKA------LSIESLSPTDNSNGVNWRTGSISLGRQQGPGMREPR 445
                              |||||      |.:    |:.:.|.::             |....|:
  Fly  1623 ------------------TFPKAPFFGNDLKV----PSHSDNFLS-------------PNRSSPK 1652

Mouse   446 LMSSCHRASRVS--IYDNVPSSHL----------------YASTGDLLDLEKDG-------LLPQ 485
            ...:..|:.|.|  .:.:.|.|.|                .:|||..|.|.|..       ...:
  Fly  1653 RTPTTPRSMRTSPLHFFSSPMSQLKEGKSDDSSSYYSDSQESSTGGKLSLRKPSKARRFLQRTGK 1717

Mouse   486 LDDILQHVNGIQEVVDDWSKNILPELQSHSTLAGDPGLSPFPSPNQVTLDFEGNSVSEGRTTPSD 550
            :|||..|.:   .......|.::.:..|::|......|:            .|.|::.|: .|..
  Fly  1718 VDDIGAHSD---SECHQGRKLLIKDANSNTTEVKVKKLT------------RGGSLNLGK-DPKK 1766

Mouse   551 VERDRTSLNESEATGVRERR--DSGVGASLTRPNRR---LRWSSFQLSHQP-------------- 596
            .:..|:|...|.:|..:|.:  :...||:....::|   :||.|||:..:|              
  Fly  1767 RDGFRSSSFRSRSTSRKEAKNDEDTAGATTNGGSKRQPVVRWHSFQMEERPNMIFRKCFSKKIEP 1831

Mouse   597 -QPSPATPHISSQTAAQLNLLQRFSLLRLTAIMEKYSMSNKHGWTCLSAQSAPGALHDLVSVNSR 660
             |........::.:|.||.::::.:|:.||..||:|..|::.||                   :.
  Fly  1832 LQEDAGGMPFAAMSAGQLQIIRKLALVTLTGHMERYCPSHRSGW-------------------NW 1877

Mouse   661 SVPKFMKRIKAPDYRDKAVFGVPLIVHVQRTGQPLPQSIQQALRYLRSNCLDQVGLFRKSGVKSR 725
            .:|||:|:||.|||:||.||||||::.:||:||.||.:::.|.|:|:.|.|||||:|||||.|||
  Fly  1878 ELPKFIKKIKMPDYKDKKVFGVPLLMILQRSGQTLPLAVRAAFRWLQLNALDQVGIFRKSGGKSR 1942

Mouse   726 IHALRQMNENFPDNVS-----YEDQSAYDVADMVKQFFRDLPEPLFTNKLSETFLHIYQYVPKEQ 785
            |..||:..| ..|:.:     ::.|.|||||||:||:||:|||.|.|.|:||||:.|:|::|.|.
  Fly  1943 IMKLREQIE-VTDSTAECMDVFDLQQAYDVADMLKQYFRELPESLLTTKMSETFVAIFQHLPAEV 2006

Mouse   786 RLQAVQAAILLLADENREALQTLLCFLHDVVNLVDENQMTPMNLAVCLAPSLFHLNL----LKKE 846
            ||.|||.|:|||.|||||.|..||.||..|.....:||||..||.||||.|:||.::    ....
  Fly  2007 RLDAVQCAVLLLPDENREILYVLLEFLTIVAANSQQNQMTSNNLGVCLAQSIFHSSISTGSASVS 2071

Mouse   847 SSPKVIQKKYATGKPDQKDLNENLAAAQGLAHMITECNRLFEVPHEMVAQSRDSYLEAEIHVPSL 911
            :||:  :|...:|.||.|:|.|..|:.:.|:.||....:::....|.:::...||:|....:| |
  Fly  2072 ASPR--RKGKGSGMPDMKELAEAKASHECLSFMIEHYKQIYTAAKEKLSKCNFSYMEESKPLP-L 2133

Mouse   912 EDLGAQLAESGATFHT---YLEHLVQGLQKEAKEKFKGWVTCSS--PDNTDLAFKKVGDGHPLKL 971
            |.||     .|..||.   ||........||.:||.:||.:.:|  ..:.|:|:|||||||||:|
  Fly  2134 EALG-----EGMQFHNWRGYLYECTSATIKEGREKTRGWFSINSLNDSSVDIAYKKVGDGHPLRL 2193

Mouse   972 WKASVEVEAPPSVVLNRVLRERHLWDEDFVQWKVVERLDKQTEIYQYVLNSMVPHPSRDFLVLRT 1036
            |:.|.|:|.||..||..|:::|..||.:.:|.:.|::||.:||||||.|:..:   :.||.|||:
  Fly  2194 WRCSTEIEGPPKEVLEFVIKQRASWDTNLLQCQTVKKLDDRTEIYQYALDGQL---TTDFCVLRS 2255

Mouse  1037 WKTDLPKGMCTLVSLSVEYEEAQ-LMGGVRAVVMDSQYLIEPCGSGKSRLTHICRIDLKGHSPEW 1100
            |:||||:|.|.:|..|:::.:|: |.|.||.||:.|:|||||||||:||:.|:.|:|:||.:|||
  Fly  2256 WQTDLPRGACVIVETSIDHAKAKPLFGAVRGVVLASRYLIEPCGSGRSRVMHLARVDVKGKTPEW 2320

Mouse  1101 YSKGFGHLCAAEVTRIRNSFQPLVAEGPETKI 1132
            |:|.:||:|:..::|||.:|:. ||:|||:|:
  Fly  2321 YNKNYGHICSHYLSRIRLAFKH-VADGPESKV 2351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Stard13NP_001156965.1 SAM_DLC2 57..120 CDD:188991 41/62 (66%)
SAM 61..120 CDD:197735 37/58 (64%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 164..218 6/53 (11%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 230..256 6/26 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 308..343 6/35 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 421..443 2/21 (10%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 514..578 13/65 (20%)
RhoGAP_DLC1 676..893 CDD:239840 108/225 (48%)
SRPBCC 920..1123 CDD:301327 97/208 (47%)
cv-cNP_001097786.1 SAM_DLC1,2-like 1382..1441 CDD:188937 37/58 (64%)
RhoGAP_DLC1 1893..2116 CDD:239840 108/225 (48%)
SRPBCC 2148..2343 CDD:301327 94/198 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 199 1.000 Domainoid score I3058
eggNOG 1 0.900 - - E1_KOG2200
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001209
OrthoInspector 1 1.000 - - otm42668
orthoMCL 1 0.900 - - OOG6_103453
Panther 1 1.100 - - O PTHR12659
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3060
SonicParanoid 1 1.000 - - X752
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.840

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