DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4b1 and Cyp4p1

DIOPT Version :9

Sequence 1:NP_058695.2 Gene:Cyp4b1 / 24307 RGDID:2480 Length:511 Species:Rattus norvegicus
Sequence 2:NP_524828.1 Gene:Cyp4p1 / 45524 FlyBaseID:FBgn0015037 Length:513 Species:Drosophila melanogaster


Alignment Length:440 Identity:132/440 - (30%)
Similarity:222/440 - (50%) Gaps:55/440 - (12%)


- Green bases have known domain annotations that are detailed below.


  Rat    99 YAKAVYSRGDPKAAD-------------VYDFFLQWIGKGLLVLDGPKWFQHRKLLTPGFHYDVL 150
            :.||:|:..|..:|:             ||:|...::..|||...|.||...||:|||.||:::|
  Fly    89 FGKAIYNIIDADSAENVLNHPNLITKGLVYNFLHPFLRTGLLTSTGKKWHARRKMLTPTFHFNIL 153

  Rat   151 KPYVAIFAESTRMMLDKWEKKASENKSFDIFCDVGHMALDTLMKCTFG--------KGDSGLGHR 207
            ..:..||...::..|.::|  ..:..:..:...:....|:::.:...|        |||.   :|
  Fly   154 NQFQEIFKTESQKFLLQFE--GQDEVTITLHDVIPRFTLNSICETAMGVKLDEMAEKGDR---YR 213

  Rat   208 DNSYYLAVSDLTLLMQQRIDSFQYHNDFIYWLTPHGRRFLRACKIAHDHTDEVIRQRKAALQDEK 272
            :|     .|.:.....:|:.:.....|.::.:.. .:.|..|..:.|..:.|:|.:|:..|:||.
  Fly   214 EN-----FSQIEECFIRRLSNPLLWGDKLFEMFA-AKDFASALDVVHRFSSEIIAKRRDLLKDEL 272

  Rat   273 ERKK-------IQQRRHLDFLDILL-----GVRDESGIKLSDAELRAEVDTFMFEGHDTTTSGIS 325
            ::..       ...::....||.|:     |:.|..||       ..||||.||||:|||:.|:.
  Fly   273 DKSSSTADDDGFVSKKRFAMLDTLIYAEKDGLIDHIGI-------CEEVDTLMFEGYDTTSIGLI 330

  Rat   326 WFLYCMALYPEHQQLCREEVRGILGDQ-DSFQWDDLAKMTYLTMCMKECFRLYPPVPQVYRQLNK 389
            :.|..|:|.|:.|:||.:|::..:.|. .:.....|.|:.||...|||..||:|.||.:.|:..:
  Fly   331 FGLMNMSLNPDKQELCYQEIQEHIDDDLSNLDVGQLNKLKYLEYFMKETTRLFPSVPIMGREAVQ 395

  Rat   390 PVTFVDGRSLPAGSLISLHIYALHRNSTVWPDPEVFDPLRFSPENAAGRHPFAFMPFSAGPRNCI 454
            .....:|..||.|:.|::|::.:|||:..|..||.|.|.||.|||...||.:|::|||||.||||
  Fly   396 ETELANGLILPKGAQITIHVFDIHRNAKYWDSPEEFRPERFLPENVQDRHTYAYVPFSAGQRNCI 460

  Rat   455 GQQFAMNEMKVVTALCLLRFEF--SLDPSKMPIKVPQLILRSKNGIHLYL 502
            |:::||.|||.:..:.|.:|:.  ::||.|:.... .:.||:::.|.:.|
  Fly   461 GKKYAMQEMKTLMVVLLKQFKVLKAIDPQKIVFHT-GITLRTQDKIRVKL 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4b1NP_058695.2 p450 47..500 CDD:278495 131/436 (30%)
Cyp4p1NP_524828.1 p450 54..509 CDD:278495 131/438 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166348757
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X23
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.850

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