DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4b1 and Cyp4e1

DIOPT Version :9

Sequence 1:NP_058695.2 Gene:Cyp4b1 / 24307 RGDID:2480 Length:511 Species:Rattus norvegicus
Sequence 2:NP_524771.1 Gene:Cyp4e1 / 44632 FlyBaseID:FBgn0015034 Length:531 Species:Drosophila melanogaster


Alignment Length:545 Identity:169/545 - (31%)
Similarity:270/545 - (49%) Gaps:78/545 - (14%)


- Green bases have known domain annotations that are detailed below.


  Rat    15 LWASVVILMVIVLKLFSL------LLRRQKLARAMDSFPGPPTHWLFGHALEIQKLGS-----LD 68
            :|  :|:...:.|.||.:      ||||:   |.::.|.||....|.|:|   .::|:     |:
  Fly     1 MW--IVLCAFLALPLFLVTYFELGLLRRK---RMLNKFQGPSMLPLVGNA---HQMGNTPTEILN 57

  Rat    69 KVVSWAQQFPHAH-PLWFGQFVGFLNIYEPDYAKAVYSRGD-PKAADVYDFFLQWIGKGLLVLDG 131
            :...|..::...: ..|.|.:...: :..|.|.:.:.|... ...:||||....|:|.|||...|
  Fly    58 RFFGWWHEYGKDNFRYWIGYYSNIM-VTNPKYMEFILSSQTLISKSDVYDLTHPWLGLGLLTSTG 121

  Rat   132 PKWFQHRKLLTPGFHYDVLKPYVAIFAESTRMMLDKWEKKASENKSFDIFCDVGHMALDTLMKCT 196
            .||.:|||::||.||:::|:.:..:..|::...:|:.:|.|.....||...:..::.||.:....
  Fly   122 SKWHKHRKMITPAFHFNILQDFHEVMNENSTKFIDQLKKVADGGNIFDFQEEAHYLTLDVICDTA 186

  Rat   197 FGKGDSGLGHRDNSYYLAVSDLTLLMQQRIDSFQYHNDFIYWLTPHGRRFLRACKIAHDHTDEVI 261
            .|...:.:.:|.:|...|..|:|..::.|..|....|.:::...|....:.:..|...|.|:|:|
  Fly   187 MGVSINAMENRSSSVVQAFKDITYTIKMRAFSPWKRNKYLFHFAPEYPEYSKTLKTLQDFTNEII 251

  Rat   262 RQ----RKAALQ-----DEKERKKIQQRRHLDFLDILLGVRDESGIKLSDAELRAEVDTFMFEGH 317
            .:    ||:.|:     ||..|||      :.|||.||..:.: |..|:..||..||.|||||||
  Fly   252 AKRIEVRKSGLEVGIKADEFSRKK------MAFLDTLLSSKVD-GRPLTSQELYEEVSTFMFEGH 309

  Rat   318 DTTTSGISWFLYCMALYPEHQQ-LCRE--EVRGI--LGDQDSFQWDDLAKMTYLTMCMKECFRLY 377
            ||||||:.:.:|.::.:|:.|: |..|  :|.|.  ||...:||  :::.|.:|.:.:||..|||
  Fly   310 DTTTSGVGFAVYLLSRHPDEQEKLFNEQCDVMGASGLGRDATFQ--EISTMKHLDLFIKEAQRLY 372

  Rat   378 PPVPQVYRQLNKPVTFVDGRSLPAGSLISLHIYALHRNSTVWPDPEVFDPLRFSPENAAGRHPFA 442
            |.||.:.|...|... :||..:|.|:.::|.:..|..|..|:.||..|.|.||..|...   ||.
  Fly   373 PSVPFIGRFTEKDYV-IDGDIVPKGTTLNLGLLMLGYNDRVFKDPHKFQPERFDREKPG---PFE 433

  Rat   443 FMPFSAGPRNCIGQQFAMNEMKVVTALCLLRFE------------------FSLDPSKM------ 483
            ::||||||||||||:||:.|:|.|.:..:..||                  ..|.|::.      
  Fly   434 YVPFSAGPRNCIGQKFALLEIKTVVSKIIRNFEVLPALDELVSKDGYISTTLGLQPAEKKSRDAH 498

  Rat   484 -----PIKVPQLILRSKNGIHLYLK 503
                 ||....:.|:|:||:||.:|
  Fly   499 NHKYDPILSASMTLKSENGLHLRMK 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4b1NP_058695.2 p450 47..500 CDD:278495 155/502 (31%)
Cyp4e1NP_524771.1 p450 34..469 CDD:278495 147/451 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166348668
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9GY
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X23
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.650

Return to query results.
Submit another query.