DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4b1 and Cyp312a1

DIOPT Version :9

Sequence 1:NP_058695.2 Gene:Cyp4b1 / 24307 RGDID:2480 Length:511 Species:Rattus norvegicus
Sequence 2:NP_001262008.1 Gene:Cyp312a1 / 40005 FlyBaseID:FBgn0036778 Length:510 Species:Drosophila melanogaster


Alignment Length:506 Identity:144/506 - (28%)
Similarity:237/506 - (46%) Gaps:36/506 - (7%)


- Green bases have known domain annotations that are detailed below.


  Rat    22 LMVIVLKLFSLLL--RRQKLARAMDSFPGPPTHWLFGHALEIQKL---GSLDKVVSWAQQFPHAH 81
            |:::.|.|:.|.:  |:.::.|....:|.||.....||...:.||   ..|.:......:..|.|
  Fly     8 LLLLALSLYLLYVFERQSRIDRLTHKWPAPPALPFIGHLHILAKLVGPHPLRRATEMINEHLHDH 72

  Rat    82 --PLWFGQFVGFLNIYEPDYAKAVYSRGDPKAADVYDFFLQWIGKGLLVLDGPKWFQHRKLLTPG 144
              .||.|..:..::....|......::...:..:.|..|..|:.:||......||...||::.|.
  Fly    73 RAKLWMGTKLYLVDCNPKDIQALCSAQQLLQKTNDYRVFENWLCEGLFTSGFEKWSHRRKIVMPA 137

  Rat   145 FHYDVLKPYVAIFAESTRMMLDKWEKKASENKSFDIFCDVGHMALDTLMKCTFGKGDSGLGHRDN 209
            |:|.::|.:||:|.:.:|::|....|.|......|....:....|||:.:...|..........:
  Fly   138 FNYTMIKQFVAVFEKQSRILLTNVAKFAESGDQIDFLQLISCFTLDTICETALGVSVGSQSSAKS 202

  Rat   210 SYYLAVSDLTLLMQQRIDSFQYHNDFIYWLTPHGRRFLRACKIAHDHTDEVIRQRKAALQDEKER 274
            .|..||..:.:::.:|:.:..|.|.||:..|.|.:|.....|..|..|:.:|::|...:..:.|.
  Fly   203 EYLDAVKSILVIIDKRLKNIFYRNSFIFKRTSHYKREQELIKTLHGFTEGIIQKRIDEINQDAEN 267

  Rat   275 KKIQQ--------RRHLDFLDILLGVRDESGIKLSDAELRAEVDTFMFEGHDTTTSGISWFLYCM 331
            :..|.        :|.|.|||.||..:...|..|:..::|.||||.:|.|.|.|.:.:::|:|.|
  Fly   268 RNYQSSDAELDGVKRTLCFLDTLLLSKGPDGKPLTVKDIREEVDTIIFGGFDLTATTLNFFMYNM 332

  Rat   332 ALYPEHQQLCREEVRGILGDQDS--FQWDDLAKMTYLTMCMKECFRLYPPVPQVYRQLNKPVTFV 394
            .|:|||||.|||||..:.|...|  ...:.:.::.:|..|:||..|:||..|...|:.....| :
  Fly   333 TLHPEHQQRCREEVWSVCGKDKSEPISIEQVRQLEFLEACIKETLRMYPSGPLTARKATANCT-I 396

  Rat   395 DGRSLPAGSLISLHIYALHRNSTVWPDPEVFDPLRFSPENAAGRHP----FAFMPFSAGPRNCIG 455
            :...:|.||.:.:....:.|....:|||.||.|.|:    |.|..|    ..|:||.||.|:|:|
  Fly   397 NDFFIPKGSDVIISPIYMGRCKDFFPDPMVFKPDRW----AIGAEPKIEATTFIPFMAGARSCMG 457

  Rat   456 QQFAMNEMKVVTALCLLRFEFS-LDPSKMPIK---------VPQLILRSKN 496
            |::||..:|:|.|..|..|.|. |...::.:|         |...:.|:||
  Fly   458 QRYAMVMLKMVLAHLLRNFLFEPLGERQVKLKLNFVITLHTVEPYLCRAKN 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4b1NP_058695.2 p450 47..500 CDD:278495 138/479 (29%)
Cyp312a1NP_001262008.1 p450 35..505 CDD:278495 135/474 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166348665
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9GY
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D214327at33208
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X23
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.750

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