DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4b1 and Cyp6a9

DIOPT Version :9

Sequence 1:NP_058695.2 Gene:Cyp4b1 / 24307 RGDID:2480 Length:511 Species:Rattus norvegicus
Sequence 2:NP_523748.2 Gene:Cyp6a9 / 36663 FlyBaseID:FBgn0013771 Length:504 Species:Drosophila melanogaster


Alignment Length:554 Identity:135/554 - (24%)
Similarity:228/554 - (41%) Gaps:121/554 - (21%)


- Green bases have known domain annotations that are detailed below.


  Rat    13 LGLWASVVILMVIVLKLFSLLLRRQKLARAMD-----SFPGPPTHWLFGHALEIQKLGSLDKVVS 72
            :|:: ||::.:|:||..:.||    |..||:.     ..|....|.|.|....:|...|...:  
  Fly     1 MGVY-SVLLAIVVVLVGYLLL----KWRRALHYWQNLDIPCEEPHILMGSLTGVQTSRSFSAI-- 58

  Rat    73 WAQQF-------PHAHPLWFGQFVGFLNIYEPDYAKAVY--------SRG-------DPKAADVY 115
            |...:       |.|...|| |..|.| :.:...||.:.        .||       ||.:..  
  Fly    59 WMDYYNKFRGTGPFAGFYWF-QRPGIL-VLDISLAKLILIKEFNKFTDRGFYHNTEDDPLSGQ-- 119

  Rat   116 DFFLQWIGKGLLVLDGPKWFQHRKLLTPGFHYDVLK-----------PYVAIFAESTRMMLDKWE 169
                      |.:|||.||...|..|:..|....:|           .::.:|.::.        
  Fly   120 ----------LFLLDGQKWKSMRSKLSYTFTSGKMKYMFPTVVKVGHEFIEVFGQAM-------- 166

  Rat   170 KKASENKSFDIFCDVGHMALDTLMKCTFGKGDSGLGHRDNSYYLAVSDLTLLMQQR--------I 226
            :|:...:..||   :.....|.:..|.||...|.|  :|......|.....:.:||        |
  Fly   167 EKSPIVEVRDI---LARFTTDVIGTCAFGIECSSL--KDPEAEFRVMGRRAIFEQRHGPIGIAFI 226

  Rat   227 DSFQ-----YHNDFIYWLTPHGRRFLRACKIAHDHTDEVIRQRKAALQDEKERKKIQQRRHLDFL 286
            :|||     .|.........|  .|||           ::|:..|.      |:|...||: ||:
  Fly   227 NSFQNLARRLHMKITLEEAEH--FFLR-----------IVRETVAF------REKNNIRRN-DFM 271

  Rat   287 DILLGVRD------ESG--IKLSDAELRAEVDTFMFEGHDTTTSGISWFLYCMALYPEHQQLCRE 343
            |.|:.:::      |||  :.|:..|:.|:...|...|.:|:::.:.:.||.:|.:.:.|...|:
  Fly   272 DQLIDLKNSPLTKSESGESVNLTIEEMAAQAFVFFGAGFETSSTTMGFALYELAQHQDIQDRVRK 336

  Rat   344 EVRGILGDQD-SFQWDDLAKMTYLTMCMKECFRLYPPVPQVYRQLNKPVTFVDGRS---LPAGSL 404
            |.:.::|..: ...::.:..|.||...:.|..|||..:|.:.|:..:... |.|..   :..|..
  Fly   337 ECQEVIGKYNGEITYESMKDMVYLDQVISETLRLYTVLPVLNRECLEDYE-VPGHPKYVIKKGMP 400

  Rat   405 ISLHIYALHRNSTVWPDPEVFDPLRFSPENAAGRHPFAFMPFSAGPRNCIGQQFAMNEMKVVTAL 469
            :.:...|:||:..::.:|..|:|..||||....|....::||..|||||||.:|...:.:...||
  Fly   401 VLIPCGAMHRDEKLYANPNTFNPDNFSPERVKERDSVEWLPFGDGPRNCIGMRFGQMQARSGLAL 465

  Rat   470 CLLRFEFSL-DPSKMPIKVPQ--LILRSKNGIHL 500
            .:.||:||: :.:.:||...:  .::.|:.||.|
  Fly   466 LINRFKFSVCEQTTIPIVYSKKTFLISSETGIFL 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4b1NP_058695.2 p450 47..500 CDD:278495 123/513 (24%)
Cyp6a9NP_523748.2 p450 35..499 CDD:278495 123/513 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

Return to query results.
Submit another query.