DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4b1 and Cyp6a19

DIOPT Version :9

Sequence 1:NP_058695.2 Gene:Cyp4b1 / 24307 RGDID:2480 Length:511 Species:Rattus norvegicus
Sequence 2:NP_611001.2 Gene:Cyp6a19 / 36662 FlyBaseID:FBgn0033979 Length:503 Species:Drosophila melanogaster


Alignment Length:521 Identity:127/521 - (24%)
Similarity:207/521 - (39%) Gaps:118/521 - (22%)


- Green bases have known domain annotations that are detailed below.


  Rat    64 LGSLDKVVSWAQQ---------FPHAHP---------LW--------------------FGQFVG 90
            :|.|..|..|..|         .||..|         ||                    .|.|.|
  Fly     9 VGVLTLVAWWVLQNYTYWKRRGIPHDPPNIPLGNTGELWRTMPLAGILKRTYLKFRKQTDGPFAG 73

  Rat    91 F-------LNIYEPDYAKAVYSRGDPKAAD--VY----DFFLQWIGKGLLVLDGPKWFQHRKLLT 142
            |       :.|.:.|:.|.|..|...|..|  ||    |   ..:...|..::|.||...|:.||
  Fly    74 FYLYAMKYIVITDVDFVKTVLIRDFDKFHDRGVYHNEKD---DPLTNNLATIEGQKWKNLRQKLT 135

  Rat   143 PGFHYDVLKP-YVAIFAESTRMMLDKWEKKASENKSFDIFCDVGHMALDTLMKCTFG-------- 198
            ..|....:|. :..:......|:....||.:|.:::.::...|.....|.:..|.||        
  Fly   136 HTFTSAKMKSMFSTVLNVGDEMIRVVDEKISSSSQTLEVTDIVSRFTSDVIGICAFGLKCNSLRD 200

  Rat   199 -------KGDSGLGHRDNSYYLAVSDLTLLMQQRID---SFQYHNDFIYWLTPHGRRFLRACKIA 253
                   .|.|.|..|.:.:.:   ||.:....::.   .||:       |.|..::|.  .||.
  Fly   201 PKAEFVQMGYSALRERRHGWLV---DLLIFGMPKLAVKLGFQF-------LLPSVQKFY--MKIV 253

  Rat   254 HDHTDEVIRQRKAALQDEKERKKIQQRRHLDFLDILLGVRD-------ESGIKLSDAELRAEVDT 311
            .|..            |.:.::|:.:.   ||:|.|:.::.       |:|:..:  |:.|:...
  Fly   254 QDTI------------DYRMKRKVTRN---DFMDTLIDMKQQYDKGDKENGLAFN--EVAAQAFV 301

  Rat   312 FMFEGHDTTTSGISWFLYCMALYPEHQQLCREEVRGILGDQD-SFQWDDLAKMTYLTMCMKECFR 375
            |...|.:..::.:.:.||.:|...:.|...|.|:..:|...: ..::|.:..:.|:...:.|..|
  Fly   302 FFLAGFEAGSTTMGFTLYELACNQDVQDKLRAEIDSVLERYNGKLEYDSMQDLFYMEKVINESLR 366

  Rat   376 LYPPVPQVYRQLNKPVTFVDGR-SLPAGSLISLHIYALHRNSTVWPDPEVFDPLRFSPENAAGRH 439
            .:|.|..:.|...||....:.: .:.||:.:.:....:|.:...:|:||.|.|.||..|....|.
  Fly   367 KHPVVAHLARIATKPYQHSNPKYFIEAGTGVLVSTLGIHHDPEFYPEPEKFIPERFDEEQVKKRP 431

  Rat   440 PFAFMPFSAGPRNCIGQQFAMNEMKVVTALCLL--RFEFSLDP-SKMPIK--VPQLILRSKNGIH 499
            ..||:||.||||||||.:|  ..|:|:..|.||  .|.|.|.| :.:|:|  :..|:|.|:.|||
  Fly   432 TCAFLPFGAGPRNCIGLRF--GRMQVIIGLALLIHNFRFELHPKTPVPMKYTINNLLLGSEGGIH 494

  Rat   500 L 500
            |
  Fly   495 L 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4b1NP_058695.2 p450 47..500 CDD:278495 125/519 (24%)
Cyp6a19NP_611001.2 p450 32..495 CDD:278495 120/496 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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