DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4b1 and Cyp6a23

DIOPT Version :9

Sequence 1:NP_058695.2 Gene:Cyp4b1 / 24307 RGDID:2480 Length:511 Species:Rattus norvegicus
Sequence 2:NP_611000.2 Gene:Cyp6a23 / 36661 FlyBaseID:FBgn0033978 Length:502 Species:Drosophila melanogaster


Alignment Length:534 Identity:126/534 - (23%)
Similarity:231/534 - (43%) Gaps:83/534 - (15%)


- Green bases have known domain annotations that are detailed below.


  Rat    21 ILMVIVLKLFSLLL---RRQKLARAMDSFPGPPTHWLFGHALEIQKLGSL-----DKVVSWAQQ- 76
            :|:.::..|.||||   ||:.........|....|.::|:..:..|...:     |....:.:. 
  Fly     3 LLLTLIALLVSLLLFMARRRHGYWQRRGIPHDVPHPIYGNMKDWPKKRHIAMIFRDYYTKYKRSV 67

  Rat    77 FPHAHPLWFGQFVGFLNIYEPDYAKAVY--------SRG-------DPKAADVYDFFLQWIGKGL 126
            :|.|...:|  |.....|.:.:..|.|.        :||       ||.:|.::.          
  Fly    68 YPFAGFYFF--FTRSAVITDLELVKRVLIKDFNHFENRGIFYNEIDDPLSATLFS---------- 120

  Rat   127 LVLDGPKWFQHRKLLTPGFHYDVLKPYVAIFAESTRMMLDKWEKKAS--ENKSFDIFCDVGHMAL 189
              ::|.||...|..|||.|....:|....|..:....|...:..|.:  |.:..:|...|.....
  Fly   121 --IEGQKWRHLRHKLTPTFTSGKMKNMFPIIVKVGEEMEKIFSAKTTTGEGQVLEIVDLVARYTA 183

  Rat   190 DTLMKCTFGKGDSGLGHRDNSYYLAVSDLTLLMQQRIDSFQYHNDFIYWLTPHGRRFLRACKIAH 254
            |.:..|.||...:.| ...|:.::.:....:: ::|.....   ||:.:..|...|.||.     
  Fly   184 DVIGNCAFGLNCNSL-QNPNAEFVTIGKRAII-ERRYGGLL---DFLIFGFPKLSRRLRL----- 238

  Rat   255 DHTDEVIRQRKAALQDEKE------------RKKIQQRRHLDFLDILLGV--RDESGIK---LSD 302
                      |..:||.::            |.:..::|| ||:|.|:.:  ::::|..   ||.
  Fly   239 ----------KLNVQDVEDFYTSIVRNTIDYRLRTNEKRH-DFMDSLIEMYEKEQAGNTEDGLSF 292

  Rat   303 AELRAEVDTFMFEGHDTTTSGISWFLYCMALYPEHQQLCREEVRGILGDQDS-FQWDDLAKMTYL 366
            .|:.|:...|...|.:|:::.:.:.||.:||..:.|...|.|:..:|...:: |.::.:.:|.||
  Fly   293 NEILAQAFIFFVAGFETSSTTMGFALYELALDQDIQDQLRAEINNVLSKHNNEFTYEGIKEMKYL 357

  Rat   367 TMCMKECFRLYPPVPQVYRQLNKPVTFVDGRSLPA-GSLISLHIYALHRNSTVWPDPEVFDPLRF 430
            ...:.|..|.||.:..:.|......:..|.:...| |:.:.:....:|.:..::|:||.|.|.||
  Fly   358 EQVVMETLRKYPVLAHLTRMTQTDFSPEDPKYFIAKGTTVVIPALGIHYDPEIYPEPEKFKPERF 422

  Rat   431 SPENAAGRHPFAFMPFSAGPRNCIGQQFAMNEMKVVTALCLLRFEFSLD-PSKMPIK--VPQLIL 492
            :.|..|.|....::||..|||||||.:|.:.:..|..|..:..::||:. .:::|:|  |..::|
  Fly   423 TDEAIAARPSCTWLPFGEGPRNCIGLRFGLMQACVGLAYLIRGYKFSVSTETQIPMKFVVKSILL 487

  Rat   493 RSKNGIHLYLKPLA 506
            .::|||||.::.|:
  Fly   488 SAENGIHLKVEKLS 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4b1NP_058695.2 p450 47..500 CDD:278495 115/497 (23%)
Cyp6a23NP_611000.2 p450 36..495 CDD:278495 114/493 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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