DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4b1 and Cyp4e2

DIOPT Version :9

Sequence 1:NP_058695.2 Gene:Cyp4b1 / 24307 RGDID:2480 Length:511 Species:Rattus norvegicus
Sequence 2:NP_001286196.1 Gene:Cyp4e2 / 35822 FlyBaseID:FBgn0014469 Length:526 Species:Drosophila melanogaster


Alignment Length:540 Identity:165/540 - (30%)
Similarity:261/540 - (48%) Gaps:68/540 - (12%)


- Green bases have known domain annotations that are detailed below.


  Rat    15 LWASVVILMVIVLKLFSLL----LRRQKLARAMDSFPGPPTHWLFGHALEIQKLGS--LDKVVSW 73
            :|..:.|.:.:.|.|.:.|    .||:   |.::.|.||....|.|:|.::.|..|  ||.|.||
  Fly     1 MWFVLYIFLALPLLLVAYLELSTFRRR---RVLNKFNGPRGLPLMGNAHQMGKNPSEILDTVFSW 62

  Rat    74 AQQFPHAH-PLWFGQFVGFLNIYEPDYAKAVYSRGD-PKAADVYDFFLQWIGKGLLVLDGPKWFQ 136
            ..|:...: ..|.|.:...| :....|.:.:.|... ...:|:|.....|:|.|||...|.||.:
  Fly    63 WHQYGKDNFVFWIGTYSNVL-VTSSKYLEFILSSQTLITKSDIYQLTHPWLGLGLLTSTGSKWHK 126

  Rat   137 HRKLLTPGFHYDVLKPYVAIFAESTRMMLDKWEKKASENKSFDIFCDVGHMALDTLMKCTFGKGD 201
            |||::||.||:::|:.:..:..|::...:...:..|:.:..||......::.||.:.....|...
  Fly   127 HRKMITPAFHFNILQDFHEVMNENSTKFIKHLKTVAAGDNIFDFQEQAHYLTLDVICDTAMGVSI 191

  Rat   202 SGLGHRDNSYYLAVSDLTLLMQQRIDSFQYHNDFIYWLTPHGRRFLRACKIAHDHTDEVIRQRKA 266
            :.:.:|.:|...|..|:...:..|.......|:.:|.|.|....:.|..|...|.|:|:|.:|..
  Fly   192 NAMENRSSSIVQAFKDMCYNINMRAFHPLKRNELLYRLAPDYPAYSRTLKTLQDFTNEIIAKRIE 256

  Rat   267 ALQ---------DEKERKKIQQRRHLDFLDILLGVRDESGIKLSDAELRAEVDTFMFEGHDTTTS 322
            |.:         ||..|||      :.|||.||....: |..|:..||..||.||||||||||||
  Fly   257 AHKSGAVSTNAGDEFTRKK------MAFLDTLLSSTID-GRPLNSKELYEEVSTFMFEGHDTTTS 314

  Rat   323 GISWFLYCMALYPEHQQLCREEVRGILGDQD-----SFQWDDLAKMTYLTMCMKECFRLYPPVPQ 382
            |:|:.:|.::.:.:.|:...:|.|.::|:.:     :||  ::::|.||.:.:||..|:||.||.
  Fly   315 GVSFAVYLLSRHQDEQRKLFKEQREVMGNSELGRDATFQ--EISQMKYLDLFIKEAQRVYPSVPF 377

  Rat   383 VYRQLNKPVTFVDGRSLPAGSLISLHIYALHRNSTVWPDPEVFDPLRFSPENAAGRHPFAFMPFS 447
            :.|...|... :||..:|.|:.::|.:..|..|..|:.||..|.|.||..|...   ||.::|||
  Fly   378 IGRFTEKDYV-IDGDLVPKGTTLNLGLVMLGYNEKVFKDPHKFRPERFELEKPG---PFEYVPFS 438

  Rat   448 AGPRNCIGQQFAMNEMKVVTALCLLRFEF--------------------------SLDPSKM--- 483
            |||||||||:||:.|:|.|.:..:..||.                          ..||.:.   
  Fly   439 AGPRNCIGQKFALLEIKTVVSKIIRNFEVLPALDELVSKDGYISTTIGLPDAERKKRDPYRHKYD 503

  Rat   484 PIKVPQLILRSKNGIHLYLK 503
            ||....|.|:|:||:::.||
  Fly   504 PILSAVLTLKSENGLYIRLK 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4b1NP_058695.2 p450 47..500 CDD:278495 154/499 (31%)
Cyp4e2NP_001286196.1 p450 35..469 CDD:278495 145/447 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166348667
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9GY
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X23
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.650

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