DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4b1 and Cyp311a1

DIOPT Version :9

Sequence 1:NP_058695.2 Gene:Cyp4b1 / 24307 RGDID:2480 Length:511 Species:Rattus norvegicus
Sequence 2:NP_572780.3 Gene:Cyp311a1 / 32170 FlyBaseID:FBgn0030367 Length:483 Species:Drosophila melanogaster


Alignment Length:520 Identity:151/520 - (29%)
Similarity:253/520 - (48%) Gaps:67/520 - (12%)


- Green bases have known domain annotations that are detailed below.


  Rat    13 LGLWASVVILMVIVLKLFSLLLRRQKLARAMDSFPGPPTHWLFGHALEIQKLGSLDK------VV 71
            :.||.    |::|.|.:: :|:|:..|.|...|.|||....|.|:|   |.:|.|..      ..
  Fly     1 MALWP----LLLITLTIW-ILVRKWTLLRLGSSLPGPWAFPLLGNA---QMVGKLRPEYIFLVFT 57

  Rat    72 SWAQQFPHAHPLWFG-QFVGFLN--------IYEPDYAKAVYSRGDPKAADVYDFFLQ---WIGK 124
            ....:|...:.|..| |...||:        :::|...||             |.|:|   .||.
  Fly    58 ELRDRFGATYRLRLGPQLWVFLHSAEETRQALHDPTLRKA-------------DTFMQLEPLIGN 109

  Rat   125 GLLVLDGPKWFQHRKLLTPGFHYDVLKPYVAIFAESTRMMLDKWEKKASENKSFDIFCDVGHMAL 189
            |||:..|..|.:.|:||||.|...:|:.:..........::.:  ..|:.....::...:....|
  Fly   110 GLLISHGAHWTRQRRLLTPAFQPQLLRSFAPAIGGHVERLVGR--LGATRGAFLEVTEPLFACLL 172

  Rat   190 DTLMKCTFGKGDSGLGHR------DNSYYLAVSDLT--LLMQQRIDSFQYHNDFIYWLTPHGRRF 246
            |.::       |:.:|.:      |:|..:....|:  ||.::.|:.. ..:|:|:..|...|..
  Fly   173 DAIV-------DTSMGAQLDTQSVDHSPIIQAFHLSSKLLFKRMINPL-LSSDWIFQRTQLWRDL 229

  Rat   247 LRACKIAHDHTDEVIRQRKAALQDEKERKKIQQRRHLDFLDILLGVRDESGIKLSDAELRAEVDT 311
            ....::.|...:.||.:|...|.|..|.   ..|.| :.||.||..:.| |..||..|:|.|::|
  Fly   230 DEQLQVIHSQMESVIEKRAKELLDMGEP---AGRAH-NLLDTLLLAKFE-GQSLSRREIRDEINT 289

  Rat   312 FMFEGHDTTTSGISWFLYCMALYPEHQQLCREEVRGILGDQDSFQWDDLAKMTYLTMCMKECFRL 376
            |:|.|.||||:.:|:.||.:|.:||.|...|:|::.:..|:.: ..|.|..:.||...:||..||
  Fly   290 FVFAGVDTTTAAMSFVLYALAKFPETQTRLRKELQDVALDETT-DLDALNGLPYLEALIKEVLRL 353

  Rat   377 YPPVPQVYRQLNKPVTFVDGRSLPAGSLISLHIYALHRNSTVWPDPEVFDPLRFSPENAAGRHP- 440
            |..||...||..:. |.:.||:..||..:.:::|.|..:...:|||..|.|.|:.||:.|...| 
  Fly   354 YTIVPTTGRQTTQS-TEIGGRTYCAGVTLWINMYGLAHDKEYYPDPYAFKPERWLPEDGAVAPPA 417

  Rat   441 FAFMPFSAGPRNCIGQQFAMNEMKVVTALCLLRFEFSLDPSKMPIKV-PQLILRSKNGIHL-YLK 503
            |:::|||.||..|||:::::..||::||..:..|:..|.|.:.|::: .|::|:::.||:: :||
  Fly   418 FSYIPFSGGPHVCIGRRYSLLLMKLLTARLVREFQMELSPEQAPLRLEAQMVLKAQQGINVSFLK 482

  Rat   504  503
              Fly   483  482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4b1NP_058695.2 p450 47..500 CDD:278495 139/480 (29%)
Cyp311a1NP_572780.3 p450 30..480 CDD:278495 139/482 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9GY
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X23
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
65.770

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