DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4b1 and Cyp4d1

DIOPT Version :10

Sequence 1:NP_058695.2 Gene:Cyp4b1 / 24307 RGDID:2480 Length:511 Species:Rattus norvegicus
Sequence 2:NP_476907.2 Gene:Cyp4d1 / 31188 FlyBaseID:FBgn0005670 Length:512 Species:Drosophila melanogaster


Alignment Length:524 Identity:165/524 - (31%)
Similarity:268/524 - (51%) Gaps:73/524 - (13%)


- Green bases have known domain annotations that are detailed below.


  Rat    19 VVILMVIVLKLF-SLLLRRQKLARAMD---SFPGPPTHWLFGHA---------------LEIQKL 64
            :||..::...|| .|||...|..|.:|   ..||||...|.||.               .|..:.
  Fly     3 LVIGAILASALFVGLLLYHLKFKRLIDLISYMPGPPVLPLVGHGHHFIGKPPHEMVKKIFEFMET 67

  Rat    65 GSLDKVVSWAQQFPHAHPLWFGQFVGFLNIYEPDYAKAVYSRGDPKAADV-------------YD 116
            .|.|:|:.          :|.|..:..|             .|:||..:|             |.
  Fly    68 YSKDQVLK----------VWLGPELNVL-------------MGNPKDVEVVLGTLRFNDKAGEYK 109

  Rat   117 FFLQWIGKGLLVLDGPKWFQHRKLLTPGFHYDVLKPYVAIFAESTRMMLDKWEKKASE--NKSFD 179
            ....|:.:||||..|.||.:.||::||.||:.:|..:|.:|.:.:|.:|...|:...:  :..|.
  Fly   110 ALEPWLKEGLLVSRGRKWHKRRKIITPAFHFKILDQFVEVFEKGSRDLLRNMEQDRLKHGDSGFS 174

  Rat   180 IFCDVGHMALDTLMKCTFGKGDSGLGHRDNSYYLAVSDLTLLMQQRIDSFQYHNDFIYWLTPHGR 244
            ::..:....:||:.:...|...:...:.|:.|..||..:::::.:|:.:..|..|..|.|||..|
  Fly   175 LYDWINLCTMDTICETAMGVSINAQSNADSEYVQAVKTISMVLHKRMFNILYRFDLTYMLTPLAR 239

  Rat   245 RFLRACKIAHDHTDEVIRQRKAAL-------QDEKERKKIQQRRHLDFLDILL-GVRDESGIKLS 301
            ...:|..:.|..|:::|.||:..|       :...:...:..:|.:.|||||| ...||.  .||
  Fly   240 AEKKALNVLHQFTEKIIVQRREELIREGSSQESSNDDADVGAKRKMAFLDILLQSTVDER--PLS 302

  Rat   302 DAELRAEVDTFMFEGHDTTTSGISWFLYCMALYPEHQQLCREEVRGILGDQDS--FQWDDLAKMT 364
            :.::|.|||||||||||||:|.:.:|.|.:|.:||.|:.|.||:|.::|:..|  ..::.|.::.
  Fly   303 NLDIREEVDTFMFEGHDTTSSALMFFFYNIATHPEAQKKCFEEIRSVVGNDKSTPVSYELLNQLH 367

  Rat   365 YLTMCMKECFRLYPPVPQVYRQLNKPVTFVDGRSLPAGSLISLHIYALHRNSTVWPDPEVFDPLR 429
            |:.:|:||..|:||.||.:.|::.:... ::|:.:|||:.|.:....|.|...::.:|.:|.|.|
  Fly   368 YVDLCVKETLRMYPSVPLLGRKVLEDCE-INGKLIPAGTNIGISPLYLGRREELFSEPNIFKPER 431

  Rat   430 FSPENAAGR-HPFAFMPFSAGPRNCIGQQFAMNEMKVVTALCLLRFE--FSLDPSKMPIKVPQLI 491
            |.....|.: :|:|::||||||||||||:|||.|:|.:.|..|..:|  |..|.|:.|:.:.:||
  Fly   432 FDVVTTAEKLNPYAYIPFSAGPRNCIGQKFAMLEIKAIVANVLRHYEVDFVGDSSEPPVLIAELI 496

  Rat   492 LRSK 495
            ||:|
  Fly   497 LRTK 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4b1NP_058695.2 CYP4B-like 67..501 CDD:410771 146/457 (32%)
Cyp4d1NP_476907.2 CYP4 73..504 CDD:410721 145/454 (32%)

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