DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4a2 and Cyp313a3

DIOPT Version :9

Sequence 1:XP_038965182.1 Gene:Cyp4a2 / 24306 RGDID:2479 Length:517 Species:Rattus norvegicus
Sequence 2:NP_650170.2 Gene:Cyp313a3 / 41488 FlyBaseID:FBgn0038007 Length:492 Species:Drosophila melanogaster


Alignment Length:509 Identity:127/509 - (24%)
Similarity:198/509 - (38%) Gaps:113/509 - (22%)


- Green bases have known domain annotations that are detailed below.


  Rat    29 LVLFKAVQFYLRRQWLLKALE----KFPSTPSHWLWGHNLKDREFQQVLTWVEK----------F 79
            |:|...|.|::...|..:.|.    |.|..     .|..:....|:.::|:..|          :
  Fly     6 LLLAVGVCFWIYFLWSRRRLYMMHFKIPGP-----MGLPILGIAFEYLITYKRKMSIRTKYMDIY 65

  Rat    80 PGACLQWLSGSTARVLLYDPDYVKVV------LGRSD--PKPYQSLAPWIGYGLLLLNGKKWFQH 136
            ...||.|: |.|..|:..||...:.:      |.||.  .||..|..   |.|||.|...||...
  Fly    66 GSTCLVWV-GPTPFVITRDPKIAEEIFLSPECLNRSSIFSKPVNSCT---GDGLLSLEASKWVDR 126

  Rat   137 RRMLTPAFHYDILKPYVKIMADSVSIMLDKWEKLDDQDHPLEIFHYVSLMTLDTVMKCAF--SHQ 199
            |:.|.|||..::|..::.|.......::...:.|..|...         ...|.:::.:|  :.|
  Fly   127 RKNLNPAFKQNVLLSFLPIFNSEAKTLVAFLDSLVGQGEK---------KVRDDIVRWSFRIATQ 182

  Rat   200 GSVQLDV------NSRSYTKAVEDLNNLIFFRVRSAFYGNSIIYNMSSDGRLSRRACQIAHEHTG 258
            .:|..||      .:.|..|:.|....:|...|...|..|.|...:                   
  Fly   183 TTVGTDVKKDASFKNDSVLKSYETFMKIIVMNVLLPFTHNKIFSTL------------------- 228

  Rat   259 SVFLLPAFLSLSDGVIKTRKAQLQNEEELQKARKKRHL-DFLDILLFAKMEDGK----------- 311
                         |..:|:||       |.|:...:.: ..:|..|..|.|.|.           
  Fly   229 -------------GGFETQKA-------LAKSNVNKMIGTIVDKKLMTKPESGSQPEITSVINKA 273

  Rat   312 -------SLSDEDLRAEVDTFMFEGHDTTASGISWVFYALATHPEHQERCREEVQS---ILGDGT 366
                   .:|.|::::|..:|:....:||...:......||..||||:...:|::.   :.|| .
  Fly   274 IELHRNGEMSREEVQSECCSFVVAAFETTGDTVYHALILLAMFPEHQDTVYQELKELFPVAGD-F 337

  Rat   367 SVTWDHLDQMPYTTMCIKEALRLYSPVPSVSRELSSPVTFPDGRSIPKGIRVTILIYGLHHNPSY 431
            .||:|.|.:|.:....:.|.|||...||...||.........|..||||:.:.|.|:..|.|..:
  Fly   338 EVTYDDLQRMVFLERVVNETLRLIPSVPFTPRETIRDFRLSSGVVIPKGVGIGIDIFATHRNRDH 402

  Rat   432 W-PNPKVFDPSRFSPDS--PRHSHAYLPFSGGARNCIGKQFAMNELKVAVALTL 482
            | .:|..|:|..|.||:  .||.:||:|||.|.|||||.::.:...|:|::..|
  Fly   403 WGTDPSSFNPDHFLPDNVRDRHPYAYIPFSKGRRNCIGWKYGLMSSKLALSKIL 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4a2XP_038965182.1 CYP4B-like 69..512 CDD:410771 118/465 (25%)
Cyp313a3NP_650170.2 p450 33..463 CDD:299894 120/482 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9GY
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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