DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4a2 and Cyp313a5

DIOPT Version :10

Sequence 1:NP_001038235.1 Gene:Cyp4a2 / 24306 RGDID:2479 Length:504 Species:Rattus norvegicus
Sequence 2:NP_650168.1 Gene:Cyp313a5 / 41486 FlyBaseID:FBgn0038005 Length:487 Species:Drosophila melanogaster


Alignment Length:432 Identity:98/432 - (22%)
Similarity:180/432 - (41%) Gaps:72/432 - (16%)


- Green bases have known domain annotations that are detailed below.


  Rat    72 VLTWVEKFPGACLQWLSGSTARVLLYDPDYVKVVL------GRSDPKPYQSLAPWIGYGLLLLNG 130
            ||||:            |.|..::..:|..::.:.      .||.... ::::..:|.|||.|..
  Fly    68 VLTWI------------GLTPVLVTCEPKILEDIFTSPNCSNRSSVVD-KAISSCLGLGLLTLKN 119

  Rat   131 KKWFQHRRMLTPAFHYDILKPYVKIMADSVSIM------------------LDKWEKLDDQDHPL 177
            ..|.:.|::|.|:|..:.:..:|.::.:..:.:                  |:||.         
  Fly   120 NHWNERRKLLLPSFKNNAVLSFVPVLNNEANFLVTLLAEFVDGGDINLLPELNKWS--------- 175

  Rat   178 EIFHYVSLMTLDTVMKCAFSHQGSVQLDVNSRSYTKAVEDLNNLIFFRVRSAFYGNSIIYNMSSD 242
              |...:.:|:...::...::|....|:    || ||   |||||...|...:..|..:..:.|.
  Fly   176 --FKIAAQITMGDEVRNQANYQNGNLLE----SY-KA---LNNLIPIGVVMPWLRNKYLGKLFSY 230

  Rat   243 GRLSRRACQIAHEHTDGVIKTRKAQLQNEEELQKARKKRHLDFLDILLFAKMEDGKSLSDEDLRA 307
            .:....|...::.....:|..:.:...|..|  .|...|.|:.:.|         ..||.:|:..
  Fly   231 EKRRLEAATQSNAFIKDIIDKKLSSTDNSSE--PALIDRILNLVRI---------GELSYDDVMG 284

  Rat   308 EVDTFMFEGHDTTASGISWVFYALATHPEHQERCREEVQSILGDGTSVTWDH--LDQMPYTTMCI 370
            |....:|...||.:..::.|...:|..|::|:...||:..:...|......|  |:::......:
  Fly   285 EFSNIIFAASDTLSITVNNVLILMAMFPKYQDNVFEELAEVFPSGGEFEASHADLEKLVKLDRVL 349

  Rat   371 KEALRLYSPVPSVSRELSSPVTFPDGRSIPKGIRVTILIYGLHHNPSYW-PNPKVFDPSRFSPDS 434
            .|.:||...||.:.|:.|..:...:|..||:|:.:.|.|:..|.|...| |....|:|..|.|::
  Fly   350 HETMRLIPAVPLLIRQTSHSIQLSNGFYIPEGVTLMIDIFHTHRNKDIWGPQANAFNPDNFLPEN 414

  Rat   435 --PRHSHAYLPFSGGARNCIGKQFAMNELKVAVALTLLRFEL 474
              .|..::|||||.|.:.|:|.:.::...|:|:|..|..:.|
  Fly   415 KRARPPYSYLPFSKGKKTCLGWKLSLISAKLALAKILRNYML 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4a2NP_001038235.1 CYP4B-like 69..499 CDD:410771 98/432 (23%)
Cyp313a5NP_650168.1 CYP313-like 65..482 CDD:410680 98/432 (23%)

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