DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4a2 and Cyp4p2

DIOPT Version :9

Sequence 1:XP_038965182.1 Gene:Cyp4a2 / 24306 RGDID:2479 Length:517 Species:Rattus norvegicus
Sequence 2:NP_610472.1 Gene:Cyp4p2 / 35946 FlyBaseID:FBgn0033395 Length:520 Species:Drosophila melanogaster


Alignment Length:487 Identity:139/487 - (28%)
Similarity:233/487 - (47%) Gaps:70/487 - (14%)


- Green bases have known domain annotations that are detailed below.


  Rat    63 NLKDREFQQVLTWVEKFP----GACLQWLSG----------STARVLLYDPDYVKVVLGRSDPKP 113
            :|..::..||.|.:.:..    .:.||:..|          :.|.:|.:.....|.|:       
  Fly    62 DLLGKDTDQVFTHLRQLAKNSGDSYLQYSMGFSNFNVIDAHNAANILNHPNLITKGVI------- 119

  Rat   114 YQSLAPWIGYGLLLLNGKKWFQHRRMLTPAFHYDILKPYVKI-MADSVSIMLDKWEKLDDQDH-P 176
            |..|.|::..|:|....|||...|.|||..||.|||..:.:| :|:|:..:    .:...|:. .
  Fly   120 YNFLHPFLRTGVLTATEKKWHTRRSMLTRTFHLDILNQFQEIFIAESLKFV----SQFQGQNEVV 180

  Rat   177 LEIFHYVSLMTLDTVMKCAFSHQGSVQLDVNSRS---YTKAVEDLNNLIFFRVRSAFYGNSIIYN 238
            :.:...:|..||:::.:.|.    .::||..:..   |......::..:..|:.:..|.:..:||
  Fly   181 VSLKDRISRFTLNSICETAM----GIKLDEMAEKGDRYRANFHIIDEGLTRRIVNPLYWDDCVYN 241

  Rat   239 MSSDGRLSRRACQIAHEHTGSVFLLPAFLSLSDGVIKTRKAQLQNEEELQKAR------------ 291
            |.: |.....|.::.||             .|..:|..|:..|  ||||:..|            
  Fly   242 MFT-GHKYNAALKVVHE-------------FSREIIAKRRVLL--EEELENRRATQTADDDICVI 290

  Rat   292 KKRHLDFLDILLFAKMEDGKSLSDEDLRAEVDTFMFEGHDTTASGISWVFYALATHPEHQERCRE 356
            :|:....||.|:.|: :|| .:.|..:..||||.|.||:|||:.|:.:....::.:...||.|.:
  Fly   291 RKKRFAMLDTLICAE-KDG-LIDDIGISEEVDTLMAEGYDTTSIGLVFGLMNMSLYAAEQELCYQ 353

  Rat   357 EVQS-ILGDGTSVTWDHLDQMPYTTMCIKEALRLYSPVPSVSRELSSPVTFPDGRSIPKGIRVTI 420
            |:|. ||.|.:::....|.::.|....|||.:|||..:|.:.|:........:|..:||..::.|
  Fly   354 EIQEHILDDLSNLNLSQLSKLNYLGYFIKETMRLYPSIPIMGRQTLQETELENGLILPKRSQINI 418

  Rat   421 LIYGLHHNPSYWPNPKVFDPSRFSPDS--PRHSHAYLPFSGGARNCIGKQFAMNELKVAVALTLL 483
            .::.:|.||.||.:|:.|.|.||.|.:  .||.:||:|||.|.|||||:::||.|:|..:.:.|.
  Fly   419 HVFDIHRNPKYWESPEEFRPERFLPQNCLKRHPYAYIPFSAGQRNCIGQKYAMQEMKTLMVVILK 483

  Rat   484 RFELLP--DPTRIPVPMPRLVLKSKNGIHLRL 513
            .|::||  ||..| |....:.|:.||.|.::|
  Fly   484 HFKILPVIDPKSI-VFQVGITLRFKNKIKVKL 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4a2XP_038965182.1 CYP4B-like 69..512 CDD:410771 137/478 (29%)
Cyp4p2NP_610472.1 p450 63..514 CDD:299894 138/484 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166348506
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X23
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.850

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