DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4a2 and Cyp4d21

DIOPT Version :9

Sequence 1:XP_038965182.1 Gene:Cyp4a2 / 24306 RGDID:2479 Length:517 Species:Rattus norvegicus
Sequence 2:NP_609129.2 Gene:Cyp4d21 / 34036 FlyBaseID:FBgn0031925 Length:511 Species:Drosophila melanogaster


Alignment Length:541 Identity:164/541 - (30%)
Similarity:255/541 - (47%) Gaps:89/541 - (16%)


- Green bases have known domain annotations that are detailed below.


  Rat    24 LLSLFLVLFKAVQFYLRRQWLLKALEKF----PST---PSHWLWGHNLKDREF-QQVLTWVEKFP 80
            ||.:.:::...|....|:||.:...||.    |.|   ..:.|....|:...| |:...:..|:.
  Fly     4 LLGIAVLIMTLVWDNSRKQWRVNTFEKSRILGPFTIPIVGNGLQALTLRPENFIQRFGDYFNKYG 68

  Rat    81 GACLQWLSGSTARVLLYDPD--YVKVVLGRS----DPKPYQSLAPWIGYGLLLLNGKKWFQHRRM 139
            .....|:.|   ..|:|..|  |.:.:|..|    ....|:.|..::|.||||..|.||...|::
  Fly    69 KTFRLWILG---ECLIYTKDLKYFESILSSSTLLKKAHLYRFLRDFLGDGLLLSTGNKWTSRRKV 130

  Rat   140 LTPAFHYDILKPYVKIMADSVSIMLDKWEKLDDQDHPLEIFHYVSLMTLDTVMKCAFSHQGSVQL 204
            |.||||:..|:.:|:||..:..||::|.:...|....:::|.:|||..||...:.|...|.:.|.
  Fly   131 LAPAFHFKCLENFVEIMDRNSGIMVEKLKNYADGKTCVDLFKFVSLEALDVTTETAMGVQVNAQN 195

  Rat   205 DVNSRSYTKAVEDLNNLIFFRVRSAFYGNSIIYNMSSDGRLSRRACQIAHEHTGSVFLLPAFL-- 267
            :.|. .||||::                 |::|..      |:|...::..:.. :|.|.|.|  
  Fly   196 EPNF-PYTKALK-----------------SVVYIE------SKRLASVSMRYNW-LFPLAAPLVY 235

  Rat   268 -----------SLSDGVIKTRKAQLQNEEELQKARK----------------KRHLDFLDILLFA 305
                       ..:|.||:.|:|      .|::||.                |..:..|||||.|
  Fly   236 RRLQKDIAIMQDFTDKVIRERRA------ILERARADGTYKPLIMGDDDIGGKAKMTLLDILLQA 294

  Rat   306 KMEDGKSLSDEDLRAEVDTFMFEGHDTTASGISWVFYALATHPEHQERCREEVQSILG--DGTSV 368
            .: |.|.|||.|:|.|||.|:|.|.|||.||:|...:|::.||:.||...||:.|:||  ...||
  Fly   295 TI-DNKPLSDVDIREEVDVFIFAGDDTTTSGVSHALHAISRHPKVQECIYEELVSVLGPDPDASV 358

  Rat   369 TWDHLDQMPYTTMCIKEALRLYSPVPSVSRELSSPVTFPDGR-SIPKGIRVTILIYGLHHNPSYW 432
            |...|.::.|....|||.:||:.|||.:.|.:  |.....|. :||....:.::.|.::.:|.|:
  Fly   359 TQTKLLELKYLDCVIKETMRLHPPVPILGRYI--PEDLKIGEITIPGNTSILLMPYYVYRDPEYF 421

  Rat   433 PNPKVFDPSRFSPDSPRHSH----AYLPFSGGARNCIGKQFAMNELKVAVALTLLRFELLPDPTR 493
            |:|.||.|.|:. |....|:    ||:|||.|.:||||::||..::|..::..:..:||||....
  Fly   422 PDPLVFKPERWM-DMKTTSNTPPLAYIPFSSGPKNCIGQKFANLQMKALISKVIRHYELLPLGAD 485

  Rat   494 IPVPMPRLVLKSKNGIHLRLK 514
            :.... ..:|.|..|.::.||
  Fly   486 LKATY-TFILSSSTGNNVGLK 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4a2XP_038965182.1 CYP4B-like 69..512 CDD:410771 150/485 (31%)
Cyp4d21NP_609129.2 p450 35..482 CDD:278495 150/484 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166348477
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9GY
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D214327at33208
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X23
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.750

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