DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cpb1 and CG8560

DIOPT Version :9

Sequence 1:NP_036665.2 Gene:Cpb1 / 24271 RGDID:2391 Length:415 Species:Rattus norvegicus
Sequence 2:NP_001261516.1 Gene:CG8560 / 38830 FlyBaseID:FBgn0035781 Length:418 Species:Drosophila melanogaster


Alignment Length:430 Identity:144/430 - (33%)
Similarity:223/430 - (51%) Gaps:40/430 - (9%)


- Green bases have known domain annotations that are detailed below.


  Rat     3 LLLALVSVALAHASEEHFDGNRVYRVSVHGEDHVNLIQELANTKEIDFW----KPDSATQVKPLT 63
            ::|.|.|||||   .|::||.::|.::........|:..|:..:..||:    ..|::::|.   
  Fly     7 VVLLLASVALA---VENYDGYKIYDINARNAFEKQLLLRLSGNEAYDFFDLPRSLDASSRVM--- 65

  Rat    64 TVDFHVKAEDVADVENFLEENEVHYEVLISNVRNALESQFDSH---------TRASGHSYTKYNK 119
                 ||.||....|:.||:..|:|.|:..|...:|..:.|.:         :.....|:..:::
  Fly    66 -----VKPEDQEGFEHLLEKYGVNYSVINENFGESLRQERDENQNQRLMNLRSAERSVSFKAFHR 125

  Rat   120 WETIEAWIQQVATDNPDLVTQSVIGTTFEGRNMYVLKI----GKTRPNKPAIFIDCGFHAREWIS 180
            ...|.|::.::|...|..|:..|.|.::|.|::..:.|    |||  .|..:|:|.|.||||||:
  Fly   126 HAEINAYLDELAAAYPSRVSVQVAGKSYENRDIKTITITNGDGKT--GKNVVFLDAGIHAREWIA 188

  Rat   181 PAFCQWFVREAVRTY--NQEIHMKQLLDELDFYVLPVVNIDGYVYTWTKDRMWRKTRSTMAGSSC 243
            .|...:.:.:.|..:  |.|     ||.:.|:.:|||||.|||.|:.|..|||||||..:: |:|
  Fly   189 HAGALYVIHQLVENFAANSE-----LLKDFDWVILPVVNPDGYEYSHTTTRMWRKTRKPIS-SAC 247

  Rat   244 LGVDPNRNFNAGWCEVGASRSPCSETYCGPAPESEKETKALADFIRNNLSTIKAYLTIHSYSQMM 308
            .|.|.||||:..|.|||||...||:|:.|....||.||:.:.|.:.:.....|.|||:|||...:
  Fly   248 YGTDANRNFDFHWGEVGASSYSCSDTFKGETAFSEPETQLIRDILLSLTGRGKFYLTLHSYGNYL 312

  Rat   309 LYPYSYDYKLPENYEELNALVKGAAKELATLHGTKYTYGPGATTIYPAAGGSDDWSYD-QGIKYS 372
            |||:.:...||.::.:.:.:.:|.|..:.:..|||||.|.....:|.|||||||:::. .....|
  Fly   313 LYPWGWTSALPSSWRDNDEVAQGGADAIKSATGTKYTVGSSTNVLYAAAGGSDDYAFGVANFPVS 377

  Rat   373 FTFELRDTGFFGFLLPESQIRQTCEETMLAVKYIANYVRE 412
            .|.|| ..|..||....|||.....||.:.:|.:|..|.:
  Fly   378 ITMEL-PAGGTGFNPSTSQIEGFVSETWVGIKAMAQKVAD 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cpb1NP_036665.2 Propep_M14 33..102 CDD:396700 18/72 (25%)
M14_CPB 112..410 CDD:349443 113/304 (37%)
CG8560NP_001261516.1 Propep_M14 29..98 CDD:280416 18/76 (24%)
M14_CP_A-B_like 123..414 CDD:199844 112/299 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166351638
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2866
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D208397at33208
OrthoFinder 1 1.000 - - FOG0000056
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100142
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.650

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