DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cpb1 and CG18417

DIOPT Version :10

Sequence 1:NP_036665.2 Gene:Cpb1 / 24271 RGDID:2391 Length:415 Species:Rattus norvegicus
Sequence 2:NP_648119.1 Gene:CG18417 / 38829 FlyBaseID:FBgn0035780 Length:427 Species:Drosophila melanogaster


Alignment Length:432 Identity:148/432 - (34%)
Similarity:216/432 - (50%) Gaps:39/432 - (9%)


- Green bases have known domain annotations that are detailed below.


  Rat     1 MLLLLALVSVALAHASEEHFDGNRVYRVSVHGED--HVNLIQELANT-------KEIDFWKPDSA 56
            ::|.|:.:|::........::|.::|.||.....  ....:.||...       .|::...| ..
  Fly     6 VILALSCLSLSAGLQRTNKYEGYKIYEVSSEARSVAFSEALSELVKNASYYEVFSELNAGNP-GK 69

  Rat    57 TQVKPLTTVDFHVKAEDVADVENFLEENEVHYEVLISNVRNALESQFDSHTRASGHSY------- 114
            ..|.|...|:|          ...:|||.|.|:::..||...|..||::: |...|.:       
  Fly    70 IMVHPHEQVNF----------VQLMEENNVKYDIINRNVGLTLSRQFETN-RMLRHWFPYNGRLG 123

  Rat   115 -TKYNKWETIEAWIQQVATDNPDLVTQSVIGTTFEGRNMYVLKI--GKTRPNKPAIFIDCGFHAR 176
             .:|...|.|..:|:.:|.::|..|....:|.::|||.:..:.|  |..|.||..|.:|.|||||
  Fly   124 TERYYNHEEINQFIEDLAGEHPRRVFLKTVGRSYEGRWLKTITITNGDARRNKNVILVDGGFHAR 188

  Rat   177 EWISPAFCQWFVREAVRTYNQEIHMKQLLDELDFYVLPVVNIDGYVYTWTKD--RMWRKTRSTMA 239
            ||||||...:.:.:.|  ||.|.:...||| .|:.:|||||.|||.||...:  |||||||.. :
  Fly   189 EWISPAAATYLINQLV--YNLEDNADLLLD-FDWVILPVVNPDGYEYTQLSEDTRMWRKTRKP-S 249

  Rat   240 GSSCLGVDPNRNFNAGWCEVGASRSPCSETYCGPAPESEKETKALADFIRNNLSTIKAYLTIHSY 304
            .|.|:|.||||||:..|.|.|||..||...|.|..|.||.|...:.|.|.:.:...:.|||:|||
  Fly   250 SSDCIGTDPNRNFDFHWNEEGASDDPCDNIYAGAKPFSEPEALVVGDLIHSYVDRGQMYLTLHSY 314

  Rat   305 SQMMLYPYSYDYKLPENYEELNALVKGAAKELATLHGTKYTYGPGATTI-YPAAGGSDDWSYDQG 368
            ..::|||:.:...:|:..|:|:.:.......:....||.|..||.|||| |.|:|.|||::::.|
  Fly   315 GSLILYPWGWTAAVPDTEEDLHEVAAAGQSAIQEATGTIYKIGPSATTINYAASGASDDYAFNAG 379

  Rat   369 IKYSFTFELRDTGFFGFLLPESQIRQTCEETMLAVKYIANYV 410
            ...|||.|| ..|..||..|.|.|....:||.:.:..:|..|
  Fly   380 FPISFTMEL-PFGGTGFDPPASDIDSIVKETWVGIAAMARKV 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cpb1NP_036665.2 Propep_M14 26..102 CDD:460505 19/84 (23%)
M14_CPB 112..410 CDD:349443 121/310 (39%)
CG18417NP_648119.1 Propep_M14 <70..105 CDD:460505 12/44 (27%)
Peptidase_M14 133..412 CDD:459730 117/283 (41%)

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