DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cpb1 and CG18585

DIOPT Version :9

Sequence 1:NP_036665.2 Gene:Cpb1 / 24271 RGDID:2391 Length:415 Species:Rattus norvegicus
Sequence 2:NP_001260213.1 Gene:CG18585 / 34041 FlyBaseID:FBgn0031929 Length:422 Species:Drosophila melanogaster


Alignment Length:417 Identity:145/417 - (34%)
Similarity:237/417 - (56%) Gaps:16/417 - (3%)


- Green bases have known domain annotations that are detailed below.


  Rat     4 LLALVSVA-LAHASEEHFDGNRVYRVSVHGEDHVNLIQELAN-TKEIDFWKP-DSATQVKPLTTV 65
            |:||.|.. |..:.:|.:|..|||::::..:..:..|:::.. ||:.:.||. |..::     .:
  Fly    10 LVALTSAGILKDSPKERYDNFRVYKLTIQNKIQLAAIEKIGELTKKYNIWKEYDERSR-----QI 69

  Rat    66 DFHVKAEDVADVENFLEENEVHYEVLISNVRNAL-ESQFDSHTRASGHSYTKYNKWETIEAWIQQ 129
            |..|...::...:..|:.|.:..|::|.||:..: |.|......::...:|||.:.|.||||:.:
  Fly    70 DIMVSPGELNHFQELLKFNNISSELMIENVQERIDEEQVTPTADSATFGWTKYYELEEIEAWLDE 134

  Rat   130 VATDNPDLVTQSVIGTTFEGRNMYVLKIGKTRPNKPAIFIDCGFHAREWISPAFCQWFVREAVRT 194
            :....|.:..:.::|.::|||.:..:||.....| |.|||:...||||||:.|...||:.:.:. 
  Fly   135 ILNAYPSVTEEFIVGKSYEGRTIRGIKISHKAGN-PGIFIESNIHAREWITSASATWFINQLLT- 197

  Rat   195 YNQEIHMKQLLDELDFYVLPVVNIDGYVYTWTKDRMWRKTRSTMAGSSCLGVDPNRNFNAGWCE- 258
             :::..::.|.|..|::::||.|:||:.|:..|||||||||...|.::|:|.|.||||::.|.: 
  Fly   198 -SEDADVRSLADNYDWHIIPVFNVDGFEYSHKKDRMWRKTRQPHATNACIGADANRNFDSYWLQN 261

  Rat   259 VGASRSPCSETYCGPAPESEKETKALADFIRNNLSTIKAYLTIHSYSQMMLYPYSY-DYKLPENY 322
            .|||.:|||||:.|..||||.|.|||.:::......|..|::.|||.|.:|.||.: :.:.||||
  Fly   262 NGASDNPCSETFAGDNPESEPEAKALVEYLTKIQDQISVYISFHSYGQYLLSPYGHTNEEFPENY 326

  Rat   323 EELNALVKGAAKELATL-HGTKYTYGPGATTIYPAAGGSDDWSYDQ-GIKYSFTFELRDTGFFGF 385
            .::..:.|..|..:..| :||.|.||..|..:|.|.|.|.||.::: |.|..:|.|.||.|.:||
  Fly   327 NDILTIGKAFADAIEALPYGTVYQYGSTADVLYVATGTSVDWVFNELGKKIGYTIEYRDKGRYGF 391

  Rat   386 LLPESQIRQTCEETMLAVKYIANYVRE 412
            :||..||...|||.|:.:..:....:|
  Fly   392 ILPPVQIIPNCEELMVGMLALIEKTKE 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cpb1NP_036665.2 Propep_M14 33..102 CDD:396700 15/71 (21%)
M14_CPB 112..410 CDD:349443 118/301 (39%)
CG18585NP_001260213.1 Propep_M14 34..105 CDD:280416 14/75 (19%)
M14_CP_A-B_like 122..415 CDD:199844 116/295 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166351643
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2866
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 262 1.000 Inparanoid score I3014
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D208397at33208
OrthoFinder 1 1.000 - - FOG0000056
OrthoInspector 1 1.000 - - mtm8990
orthoMCL 1 0.900 - - OOG6_100142
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X86
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.700

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