DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cpb1 and CG8945

DIOPT Version :9

Sequence 1:NP_036665.2 Gene:Cpb1 / 24271 RGDID:2391 Length:415 Species:Rattus norvegicus
Sequence 2:NP_573190.1 Gene:CG8945 / 32693 FlyBaseID:FBgn0030815 Length:1430 Species:Drosophila melanogaster


Alignment Length:465 Identity:126/465 - (27%)
Similarity:220/465 - (47%) Gaps:89/465 - (19%)


- Green bases have known domain annotations that are detailed below.


  Rat    20 FDGNRVYRVSVHGEDHVNLIQELANTKE---IDFWKPDSATQVKPLTTVDFHVKAEDVADVENFL 81
            :|..:::|:....|:.|..::|....::   :.:.|..|   ::.||  |..|..:.:.|.:..|
  Fly   981 YDKYQIWRLKPQDEEQVRALEEFKKGEDGVKLQWLKGPS---LRGLT--DVLVPPKMLVDFQGTL 1040

  Rat    82 EENEVHYEVLISNVRNAL-----ESQFDSHTRAS--------GHSYTKYNKWETIEAWIQQVATD 133
            ....:.:||||.:|..|:     :..:...||.|        ..::.:|:..:.|..:::.|...
  Fly  1041 NYEGIAHEVLIFDVGKAIAYELTKEDYLQTTRPSKPRPTAPPPMTWNRYHNHDEIVKYLETVRMR 1105

  Rat   134 NPDLVTQSVIGTTFEGRNMYVLKIGK---------------TRPNKP-------AIFIDCGFHAR 176
            :|.||....||.:||||.:.|:||..               .||.:.       |:|::.|....
  Fly  1106 HPQLVELIHIGRSFEGRPLIVVKIESKQTAAAANNDGLHTIKRPKRKRKSGQANAVFVEAGAQGL 1170

  Rat   177 EWISPAFCQWFVREAVRTY-----NQEIHMKQLLDELDFYVLPVVNIDGYVYTWTKDRMWRKTRS 236
            .||.||...|.:.|.:|..     |:::   :.:....:|::||:|.|||.|:...||.|:|:||
  Fly  1171 AWIGPAAATWMIAELLRLMKTNKSNEDV---EFIRNTTWYIMPVLNPDGYAYSHEYDRFWKKSRS 1232

  Rat   237 T--------MAGSS-------------CLGVDPNRNFNAGWCEVGASRSPCSETYCGPAPESEKE 280
            .        :..|:             |.|||.:||:...|.:.|:|::||:|.|.||||.||.|
  Fly  1233 QHQTPPPSGLLDSAMTWLQQKRGPDKVCYGVDLDRNWLYHWGKRGSSKAPCNEFYAGPAPFSEPE 1297

  Rat   281 TKALADFIRNNLSTIKAYLTIHSYSQMMLYPYSYDYKLPENYEELN-----ALV--KGAAKELAT 338
            |||:::|:.:..:.||.|:::.:|.|::.||...:...  |.|.|:     |:|  .|..|:   
  Fly  1298 TKAVSEFLMDYRTQIKLYISLQAYGQVISYPVKANSTF--NSERLDDFLDVAMVGTDGLRKK--- 1357

  Rat   339 LHGTKYTYGPGATT--IYPAAGGSDDW-SYDQGIKYSFTFELRDTGFFGFLLPESQIRQTCEETM 400
              |:|..|...|:.  |...:|.:|.: :|:.||.:|:|.:|.|.|..|:|||.|.|..|..:..
  Fly  1358 --GSKSRYKVDASNDLIEQRSGCADAFAAYEIGIPFSYTLQLADNGVHGYLLPSSAIEPTARDAF 1420

  Rat   401 LAVKYIANYV 410
            ..:..:.:|:
  Fly  1421 EIISGMLDYI 1430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cpb1NP_036665.2 Propep_M14 33..102 CDD:396700 17/76 (22%)
M14_CPB 112..410 CDD:349443 103/355 (29%)
CG8945NP_573190.1 Propep_M14 988..1058 CDD:280416 17/74 (23%)
M14_CP_A-B_like 1089..1430 CDD:199844 103/350 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2866
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D208397at33208
OrthoFinder 1 1.000 - - FOG0000056
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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