DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cpb1 and CG3108

DIOPT Version :9

Sequence 1:NP_036665.2 Gene:Cpb1 / 24271 RGDID:2391 Length:415 Species:Rattus norvegicus
Sequence 2:NP_572262.1 Gene:CG3108 / 31506 FlyBaseID:FBgn0029807 Length:1132 Species:Drosophila melanogaster


Alignment Length:410 Identity:145/410 - (35%)
Similarity:217/410 - (52%) Gaps:23/410 - (5%)


- Green bases have known domain annotations that are detailed below.


  Rat    14 HASEEHFDGNRVYRVSVHGEDHVNLIQELANTKEIDFWKPDSATQVKPLTTVDFHVKAEDVADVE 78
            :|....:||.:|:|:.|..:....:..||.:..:...||     :||  ..||:.:|.:.:|..|
  Fly   717 NAHLRRYDGAQVWRIVVQTDKDKRMADELQSKYDGQLWK-----EVK--QEVDYLLKPQVLAAAE 774

  Rat    79 NFLEENEVHYEVLISNVRNALESQFDSHTRAS------GHSYT--KYNKWETIEAWIQQVATDNP 135
            ..:....:...|||.|::..:|.:.....:.:      ||..|  .|::.|.|..:|..:|...|
  Fly   775 RHIRAANLSRIVLIDNLQRVIEKENPPAEKIAELQNRKGHRLTWQAYHRLEDIHGFIDYMAKTYP 839

  Rat   136 DLVTQSVIGTTFEGRNMYVLKIGKTRPNKPAIFIDCGFHAREWISPAFCQWFVREAVRTYNQ-EI 199
            |:.:..:||.:.|.|.:.:|||.......|.|:||.|.|||||||||...:...:.|..:.. ..
  Fly   840 DICSTEIIGYSVEKRPLKILKISNGNARNPGIWIDGGMHAREWISPATVTYIANQLVEGWEDLPE 904

  Rat   200 HMKQLLDELDFYVLPVVNIDGYVYTWTKDRMWRKTRSTMAGSSCLGVDPNRNFNAGWCEVGASRS 264
            ||:    .:::|:.||.|.|||.|:.|.||:|||.... .|..|.|||.||||...|...|.|.|
  Fly   905 HMR----SINWYIHPVANPDGYEYSHTTDRLWRKNMRA-HGRQCPGVDLNRNFGYKWGGKGTSAS 964

  Rat   265 PCSETYCGPAPESEKETKALADFIRN-NLSTIKAYLTIHSYSQMMLYPYSYDYKLPENYEELNAL 328
            |||:||.|....||.||..::.||.. ...|.:|||:.|||.|.:|||:.|||:|.::..:|:.:
  Fly   965 PCSQTYRGSKAFSEPETFYISKFISGFPRETFQAYLSFHSYGQYILYPWGYDYQLTQDRADLDRV 1029

  Rat   329 VKGAAKELATLHGTKYTYGPGATTIYPAAGGSDDWSYD-QGIKYSFTFELRDTGFFGFLLPESQI 392
            .:.|...:....|.|||.|..|||:||||||||||:.. .||||::|.|:.|||.:||:||...|
  Fly  1030 ARQAGTSITKSTGVKYTVGSSATTLYPAAGGSDDWAKGIAGIKYAYTIEMGDTGRYGFVLPARFI 1094

  Rat   393 RQTCEETMLAVKYIANYVRE 412
            :...::.:.....:|..:.:
  Fly  1095 QYNGKDGVTFADTVARAIAQ 1114

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cpb1NP_036665.2 Propep_M14 33..102 CDD:396700 16/68 (24%)
M14_CPB 112..410 CDD:349443 122/302 (40%)
CG3108NP_572262.1 Propep_M14 730..797 CDD:280416 17/73 (23%)
M14_CP_A-B_like 821..1112 CDD:199844 120/295 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 222 1.000 Domainoid score I2495
eggNOG 1 0.900 - - E1_COG2866
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D208397at33208
OrthoFinder 1 1.000 - - FOG0000056
OrthoInspector 1 1.000 - - mtm8927
orthoMCL 1 0.900 - - OOG6_100142
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X86
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.720

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