DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cpa1 and CG32379

DIOPT Version :9

Sequence 1:NP_058694.2 Gene:Cpa1 / 24269 RGDID:2388 Length:419 Species:Rattus norvegicus
Sequence 2:NP_729252.2 Gene:CG32379 / 326211 FlyBaseID:FBgn0052379 Length:344 Species:Drosophila melanogaster


Alignment Length:360 Identity:105/360 - (29%)
Similarity:180/360 - (50%) Gaps:47/360 - (13%)


- Green bases have known domain annotations that are detailed below.


  Rat    81 YHGISYEIMIEDVQLLLDEEKQQ---------------MSAFQARALSTDSFNYATYHTLDEIYE 130
            || :.|:::|||:..|:..::.:               :|||               :|..||.:
  Fly     4 YH-LEYKVLIEDLAPLVHAQRAENLRKKLLIQWPHIDVLSAF---------------YTHSEIND 52

  Rat   131 FMDLLVAEHPQLVSKIQIGNTFEGRPIHVLKFSTGG--TNRPAIWIDTGIHSREWVTQASGVWFA 193
            ::|.|:...|:.|...|.|.::|.||:.||..:.|.  .|:|.|.||..:|:|||::.:..::..
  Fly    53 YLDSLLERFPKRVQVKQFGWSYERRPLKVLTITNGDGRRNKPVILIDGTVHAREWISPSMALYII 117

  Rat   194 KKITKDYGQDPTFTAVLDNMDIFLEIVTNPDGFAYTHKTNRMWRKTRSHTQGSLCVGVDPNRNWD 258
            :::..:||.:   ..:|.:.|..:..|.|.||:.|||..:|.|||:|..|....|:|.|.|||:.
  Fly   118 QQLLDNYGDN---QELLQDYDWVIMPVVNADGYEYTHTDSRYWRKSRRPTSNPECIGTDINRNFG 179

  Rat   259 AGFGM-AGASSNPCSETYRGKFPNSEVEVKSIVDFVTSH-GNIKAFISIHSYSQLLLYPYGYTSE 321
            ..:|. .|:||:||...|||:.|..:.|.:.:.|.:..: |.:..::|:|||....|.|:||||:
  Fly   180 YEWGHDEGSSSDPCENIYRGERPFDQSESQVLRDVMLHYKGRLNFYLSLHSYGNYFLLPWGYTSD 244

  Rat   322 PAPDQAELDQLAKSAVTALTSLHGTK--FKYGSIIDTIYQASGSTIDWTYSQGI---KYSFTFEL 381
             .||..: |.::.:...|...::.|.  :.|||....:|..||.|.|:.:  |:   ..:.|.||
  Fly   245 -FPDTYQ-DMMSVADAGAKAIIYSTNGIYSYGSTYYVLYPTSGDTTDFAF--GVVNATVAMTMEL 305

  Rat   382 RDTGLRGFLLPASQIIPTAEETWLALLTIMDHTVK 416
            ...|.:||....|||.....|:|:.:..:....::
  Fly   306 PAAGFQGFDPWISQIERLVTESWVGVRAMAAEVIR 340

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Cpa1NP_058694.2 Propep_M14 32..100 CDD:396700 7/18 (39%)
M14_CPA 117..417 CDD:349442 95/309 (31%)
Substrate binding. /evidence=ECO:0000250|UniProtKB:P00730 179..182 1/2 (50%)