Protein Alignment Cd53 and Tsp39D

DIOPT Version :10

• Sequence 1: NP_036655.1
• Gene: Cd53 / 24251
• RGDID: 2310
• Length: 219
• Species: Rattus norvegicus
• Sequence 2: NP_523612.3
• Gene: Tsp39D / 35405
• FlyBaseID: FBgn0032943
• Length: 235
• Species: Drosophila melanogaster
• Alignment Length: 226
• Identity: 72/226 - (31%)
• Similarity: 114/226 - (50%)
• Gaps: 22/226 - (9%)

  Rat     1 MGMSSLKLLKYVLFFFNFLFWVCGCCILGFGIHLLVQNTYGIL--FRNLPFLTLGNVLVIVGSII 63
            |....|..:||:.||.|.||.:.|  :|.|.:..:||..|...  |.:....|...:|:|||:.:
  Fly     1 MASGGLTCVKYLTFFCNLLFALTG--LLIFLVGGMVQLNYAHYSNFVSDHVWTAPIILMIVGAAV 63

  Rat    64 MVVAFLGCMGSIKENKCLLMSFFVLLLLILLAEVTLAILLFVYEKKINTLVAEGLNDSIQHYHSD 128
            .|:.||||.|::||:.|:::||.:|.::|.|.|:.|.:..:|....::.::....|.::|||...
  Fly    64 AVICFLGCCGALKESSCMILSFALLAVVIFLFEIGLGLAGYVKHTGLHQIMESQFNSTMQHYKER 128

  Rat   129 NSTRMAWDFIQSQLQCCGVNGSSDW-----ISGPPSSCPS-------------GADVQGCYKKGQ 175
            ...|.||..:|::|.|||:||.:||     .|..|::|.|             .|...||.:|..
  Fly   129 ADYRDAWTLLQTELDCCGINGPNDWETVYRNSTLPAACCSVINLSEAKECTNTHATQHGCLQKLL 193

  Rat   176 AWFHSNFLYIGIVTICVCVIQVLGMSFALTL 206
            ....|..|.:..|.:.|..||:|.:.||..|
  Fly   194 EILDSKTLILASVVLGVAGIQMLTILFACCL 224

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Cd53	NP_036655.1	Tetraspanin	9..208	CDD:459767	70/218 (32%)
		CD53_like_LEL	104..186	CDD:239417	27/99 (27%)
Tsp39D	NP_523612.3	Tetraspanin	9..226	CDD:459767	70/218 (32%)
		tetraspanin_LEL	131..>167	CDD:351888	14/35 (40%)