DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment C4a and Tep1

DIOPT Version :9

Sequence 1:NP_113692.2 Gene:C4a / 24233 RGDID:620005 Length:1737 Species:Rattus norvegicus
Sequence 2:NP_523578.1 Gene:Tep1 / 34937 FlyBaseID:FBgn0041183 Length:1354 Species:Drosophila melanogaster


Alignment Length:1560 Identity:363/1560 - (23%)
Similarity:611/1560 - (39%) Gaps:398/1560 - (25%)


- Green bases have known domain annotations that are detailed below.


  Rat   115 LKNTASKATETQ-GVNLLFSSRRGHIFVQTDQPIYNPGQRVRYRVFALDQKMRPSTDTLTVTVEN 178
            ||...|...|.| ...|.|:.....:::|:|:..|.||.::::||..||:..||:.....:.:|.
  Fly    91 LKVMGSGGIEFQNSTKLSFAPDLNWLYIQSDKATYKPGDKIQFRVLFLDKNTRPAVIDKPIKIEI 155

  Rat   179 SHG---LRVRKKEVFAPTSIFQDDFIIPDISEPGTWKISARFSDGLESNRSTHFEVKKYVLPNFE 240
            ..|   |....|::.....::..:..:.|....|.|.::|...|  |...:....|.|||:|.||
  Fly   156 RDGDQNLIKSWKDIKPAKGVYSGELQLSDRPVLGNWTVTATVQD--EGKVTNVLVVDKYVVPKFE 218

  Rat   241 VKLTPWKPYILTVPSYREEIQLDVQARYVYGKPVQG-VAYTRFALMDEQGKKSFLRGLETQTKL- 303
            |.:...|    .|.:....|:..::|||.:.|||:| |..|             :.|..|:..| 
  Fly   219 VVVLTAK----NVAASAGYIRATIKARYTFKKPVKGHVVAT-------------IEGSSTEQSLP 266

  Rat   304 VEGQTH----ISISRDQFQAALGKVNTEIGDLE--GLRLYAAVAVIESPGGEMEEAELTSWPFVS 362
            ::|:.:    ||.:..:.......|..|:.|::  |    .|...:.....::|:   ..||   
  Fly   267 IDGEVNVEFPISATAKRLLKITAIVTEELTDIKHNG----TAYVTVHQHRHKLED---LFWP--- 321

  Rat   363 SAFSLDLSHTKQHLVPGAPFLLQALVREMSGSEASDVPVKVSATLLSGSDSKVLDF-----QQNT 422
                       .|..||.....:.:||.:.||...|             .||:::|     |.:.
  Fly   322 -----------THYRPGVSSEFKTVVRNLDGSPVMD-------------SSKMVNFNVLCCQVSK 362

  Rat   423 NGIGQVSFSI---HVP-PTITELRLLVS----AGSLYPAVAKLTVQAPPSRGPGFLSIEPL---- 475
            |....:..||   |:. |...:..|:.|    |.::...:.||.              :||    
  Fly   363 NFSASLQNSIATEHIMLPETCQSCLVTSTFDTAENIERYIYKLN--------------KPLMIAI 413

  Rat   476 DLRSPRVGDTFVLSLRTVGIPMPTFSHYYYM-IISRGQI-MAMSREPRRALTSISVLVDHHLAPS 538
            :.:.|:     :..|..:.|...|:..|:.: :::||.| :::.:|.:....|..:    ...|:
  Fly   414 NTKKPQ-----LRKLLKINIISDTYLPYFILTVVARGNIVLSLFQEMKEKKKSQEI----EFEPT 469

  Rat   539 FYFV---AYFYH---QGLPVANSLLINVQPGDCEGKLELKVDGAKEYRNGDSMKLQLQTDSEALV 597
            |..|   ..|.|   .|:.:::...:::: .|.|..:|:..  ..|....|.:.|:::|:..:.|
  Fly   470 FALVPQATIFVHYIIDGVLMSDEKTVDIE-RDFENTIEILT--TNEALPRDEVSLKVKTNPHSFV 531

  Rat   598 ALGAVDTALYAVGGRSHKPLDMSKVFEVMNSYNLGCGPGGGDDALQVFQTAGLAFSDGDRLTQTK 662
            .|..||.::..:  ||...|:...:...:.:|:                      :|...||.. 
  Fly   532 GLLGVDQSVLLL--RSGNDLNRDLILNNLATYS----------------------TDLVILTNA- 571

  Rat   663 ENLSCPKEKKSRQKRNVNFQKAISEKLGQYSSPDTKRCCQDGMTKLPMARTC---EQRAARVPQP 724
                           |:|..::..   |.|::|....|     |...:.||.   |......|.|
  Fly   572 ---------------NINIYRSSG---GCYTNPGYTNC-----TGSLIGRTMFKNEPTKNSGPVP 613

  Rat   725 ACREPFLSCCKFAEDLRRNQTRSQAGLARAQDMLQEEDLIDEDDILVRSFFPENWLW-RVEPV-- 786
            ..                ..||:||.|..                 ||..|||.||: .:..|  
  Fly   614 IV----------------GSTRAQASLPP-----------------VRKLFPETWLFSNITDVGA 645

  Rat   787 DRSKLLTVWLPDSLTTWEIHGVSLSKSKGLCVAK-PTRVRVFREFHLHLRLPISVRRFEQLELRP 850
            :...::...:||:||:|.|.|.|||...||.|.: |:|:|||:.|.:...||.||:|.|.:.:..
  Fly   646 NGEYIIKETVPDTLTSWVITGFSLSPQSGLAVTRNPSRIRVFQPFFITTNLPYSVKRGEVIAIPV 710

  Rat   851 VLYNYLSEDVTVSVHVSPVEGLC------------LAGGGLLAQQVSVPAGSARPVAFSVVPTAA 903
            :::|||..||...|.:...:|..            ...|....:.:.:||.:.|.::|.:.|...
  Fly   711 IVFNYLGMDVKAKVLMDNSDGQYEFIETTNKNVSQYLRGVRRKKTLWIPANTGRGISFMIRPKKV 775

  Rat   904 ASIPLKVVARGSFTIGDAVSKILQIEKEGA--IHREEIVYNLDPLNNLGRSLEIPGSS-----DP 961
            ....||:.|...:. ||.:.:||::|.:|.  ...:.::.|:..||.  |||..|..:     ..
  Fly   776 GLTTLKITAISKYA-GDRLHQILKVEADGVQKYVNKAVLINVQRLNR--RSLAPPEKTIIIEKAD 837

  Rat   962 NVIPDGDFSSFVRVTASEPLETLGSEGALSPGGVASLLRLPRGCAEQTMIYLAPTLTASHYL--- 1023
            |||...:...|         |..|:..|.....:..|:.||.||.||.|....|::.|..||   
  Fly   838 NVIEGSETVEF---------EVCGTSQAPQLEHLDDLVHLPCGCGEQNMFNFVPSILALSYLKAK 893

  Rat  1024 DRTEQWSKLPPETKDHAVDLIQKGHMRIQQFRKKDGSFGAWLHRDS--STWLTAFVLKILSLAQE 1086
            :|.:|      |.::.|...::.|:.....:::.||||.||...|:  ||||||:|::....|.:
  Fly   894 NRQDQ------EIENKAKRYVETGYQIELNYKRNDGSFSAWGQHDALGSTWLTAYVIRSFHQAAK 952

  Rat  1087 QIGDSPEKLQETAGWLLGQQLDDGSFHDPCPVIHRGMQGGLVGTDETVALTAFVVIALHHGLAVF 1151
            .|......|.....:|:.:|..||.|.:...|||......|       |||:||:      |..|
  Fly   953 YIDIDKNVLVAGLDFLVSRQSTDGKFKELGMVIHNSHGSPL-------ALTSFVL------LTFF 1004

  Rat  1152 QDENSQQLKKRVEASITKANSFLGQKASAGLLGAHAS------AITAYALTLTKASEDLRNV--A 1208
            ::|......|.|   |.:|..|:       :...|.|      ||.|.||:|.:.    ||.  .
  Fly  1005 ENEEYMPKYKHV---IDRAVEFV-------VTEVHQSNEPYDLAIAALALSLARN----RNAYKV 1055

  Rat  1209 HNSLMAMAEETGENLYWGSAIGSQDNVVSSTPAPRNPSEPVPQAPALWIETTAYGLLHLLLREGK 1273
            .:.|..:|...|::.:|   .|| |...||.                 :|||:|.||.||    :
  Fly  1056 LDKLDKLATRRGDHKWW---TGS-DKCKSSE-----------------VETTSYVLLALL----E 1095

  Rat  1274 GEMADK---VATWLTHQGSFQGGFRSTQDTVVTLDALSAYWIASHTTEEKALNVTLSSMGRNGYK 1335
            ..::|:   :..||..:.:..|||.|:|||||.:.||:.|.:.||.:.| |:::....:  |..|
  Fly  1096 HNISDEPKPIVDWLISKRNSNGGFVSSQDTVVGIMALTKYELQSHASTE-AIDIEFWHL--NEDK 1157

  Rat  1336 SHLLQLNNHQVKGLEEELKFSLGSTINVKVGGNSKGTLKILRTYNVLDMKNTTCQDLRIEVTVTG 1400
            .|:.....::.|....:|.   .:|..||:....:|..::..||.                    
  Fly  1158 KHVRVTKENEFKVQTHQLP---ENTNEVKLLAKGQGRAQVQLTYR-------------------- 1199

  Rat  1401 YVEYTREANEDYEYDYDMPAADDPSVHSQPVTPLQLFEGRRSRRRR--------EAPKAADEQES 1457
            |...|:||...::....:                     ::|.:.|        ..|.||.|:..
  Fly  1200 YNVATKEARPSFKLTTTV---------------------KKSHKGRLILGICGTYTPIAASERNK 1243

  Rat  1458 RVQYTVCIWRNGNLGLSGMAIADITLLSGFQALRADLE---KLTSLSDRYVSHFET--DGPHVLL 1517
                           .:.||:..:.|.||:.   .|:|   .:.::||  |...||  :...|.:
  Fly  1244 ---------------TTNMALMQVQLPSGYV---CDIEPFADIEAISD--VKRVETKNEDTEVHI 1288

  Rat  1518 YFDSV-PTTRECVGFGALQEVAVGLVQPASAVLYDYYSPDHKCSVFYAAPTKSKLLSTLCSADVC 1581
            ||:.: |..|:|:...|:...||..::|:...|||||:.:...:.||...|      :||  |:|
  Fly  1289 YFEKLSPGDRKCLTLEAIYTHAVANLKPSWVRLYDYYATERSATEFYHVDT------SLC--DIC 1345

  Rat  1582  1581
              Fly  1346  1345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C4aNP_113692.2 A2M_N 139..231 CDD:280081 21/94 (22%)
A2M_N_2 475..608 CDD:285005 28/144 (19%)
ANATO 684..752 CDD:237984 14/70 (20%)
A2M 779..866 CDD:278630 34/90 (38%)
complement_C3_C4_C5 991..1310 CDD:239226 97/334 (29%)
A2M_comp 1046..1312 CDD:284982 82/278 (29%)
A2M_recep 1474..1563 CDD:284981 27/94 (29%)
NTR_complement_C4 1581..1735 CDD:239639 1/1 (100%)
Tep1NP_523578.1 A2M_N 116..201 CDD:280081 20/86 (23%)
A2M_N_2 411..542 CDD:285005 27/142 (19%)
A2M 634..726 CDD:278630 34/91 (37%)
A2M_2 859..1135 CDD:239227 97/333 (29%)
A2M_comp 910..1135 CDD:284982 81/276 (29%)
A2M_recep 1245..1335 CDD:284981 27/94 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166343878
Domainoid 1 1.000 50 1.000 Domainoid score I11352
eggNOG 1 0.900 - - E1_COG2373
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D177369at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11412
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.850

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