DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment C4a and Tep3

DIOPT Version :9

Sequence 1:NP_113692.2 Gene:C4a / 24233 RGDID:620005 Length:1737 Species:Rattus norvegicus
Sequence 2:NP_523507.2 Gene:Tep3 / 34045 FlyBaseID:FBgn0041181 Length:1469 Species:Drosophila melanogaster


Alignment Length:1678 Identity:400/1678 - (23%)
Similarity:643/1678 - (38%) Gaps:401/1678 - (23%)


- Green bases have known domain annotations that are detailed below.


  Rat    25 LFSPSVVNLGTPLSVGVQLLDAPAGQEVK----GSVYLRNPTSGPCSPKKDFKLSSGNDF--VLL 83
            :.:|:.:...:...|.|.|.:||.....|    ||.|            .|||......|  .||
  Fly    33 IIAPNTLRPNSQFHVAVSLHNAPESATFKVGILGSSY------------TDFKTVELRPFSTQLL 85

  Rat    84 RLEVPLKDVRSCGLFGLRRAPHIQLVAHSPWLKNTASKATETQGVNLLFSSRRGHIFVQTDQPIY 148
            ..|:|           ..|....:|.|..   ........|||   |.|.|::..:.||||:.||
  Fly    86 HFEIP-----------ALRTDRYRLTAEG---LGGVQFTNETQ---LHFESKQHTVLVQTDKSIY 133

  Rat   149 NPGQRVRYRVFALDQKMRPST--DTLTVTVENSHGLRVRK-KEVFAPTSIFQDDFIIPDISEPGT 210
            .||..|.|||..||..::|:.  ..:.|.:::|....:|. |::....||:.::..:.|....||
  Fly   134 KPGDLVHYRVLILDANLKPARGYGRVHVDIKDSGDNIIRSYKDIRLTNSIYSNELRLSDSPRFGT 198

  Rat   211 WKISARFSDGLESNRSTHFEVKKYVLPNFEVKLTPWKPYILTVPSYRE-EIQLDVQARYVYGKPV 274
            |.|....||   ...:..||:..::||.|.|.:...|..|     |:: :|...|:|.|.:|:|:
  Fly   199 WSIVVDVSD---QEHTQTFEILDHILPKFVVDIDTPKHAI-----YKDGKIAATVRAHYAFGQPI 255

  Rat   275 QGVA----YTRFALMDEQGKKSFLRGLETQTKL-VEGQTHISISRDQFQAALGKVNTEI---GDL 331
            .|.|    |..|.    ...:.|:..|.|:..: ::|..:....          :..|:   .|.
  Fly   256 VGEATLSIYPTFF----GSLQPFVNDLITRKVVPIDGNAYFEFD----------IENELHLKQDY 306

  Rat   332 EGLRLYAAVAVIESPGGEMEEAELTSWPFVSSAFSLDLSHTK-------QHLVPGAPFLLQALVR 389
            |  |.|...|::       ||....|....|:..:|.|:|.:       .:.:||.||...|.:.
  Fly   307 E--RQYLLDALV-------EEKSTGSVQNYSTVLTLHLNHYRVEAVKVPSYYIPGVPFEATARIA 362

  Rat   390 EMSGSEASDVPVKVSATLLS--GSDSKVLDFQQNTNGIGQVSFSIHVPPTITEL----RLLVSAG 448
            ...|.:..|...:::|.|.:  ||.........:.:..|::.....||  |.:.    .::|...
  Fly   363 RNDGGQLRDFNPQITAYLTNVYGSSEMYNRTAYSLDASGEIKMKFTVP--IGDRDEFHSIIVDYQ 425

  Rat   449 SLYPAVAKLTVQAPPSR---GPGFLSIEPLDLRSPRVGDTFVLSLRTVGIPMPTFSHYYYMIISR 510
            .:...|.|:     ||:   ...:::.:.|:.| |.|.....:.:|:    .....::.|.::.|
  Fly   426 GVISEVGKI-----PSKHLHSKNYITAKVLNDR-PTVNQEISVVVRS----FAPIKYFMYQVVGR 480

  Rat   511 GQIMAMSREPRRALTSISVLVDHHLAPSFY----FVAYFYHQGLPVANSLLINVQPGDC---EGK 568
            |.|: :||.           ||  :||..:    |:|.|  ..:|.||.|:..|..|:.   |..
  Fly   481 GDII-LSRN-----------VD--VAPGTFHTIKFLASF--AMMPRANLLVYTVIDGEFVYDEQV 529

  Rat   569 LEL--------KVDGAKEYRNGDSMKLQLQTDSEALVALGAVDTALYAVGGRSHKPLDMSKVFEV 625
            ::|        :||.......|..:.:.:.|...:.|.|..||.  .|...||...|...::.:.
  Fly   530 IQLEENLLNAVQVDAPIRAPPGQDIDIGISTKPYSYVGLMLVDQ--NANDLRSGHDLTHKRLMDA 592

  Rat   626 MNSYNLGCGPGGGDDALQVFQTAGLAFSDGDRLTQTKENLSCPKEKKSRQKRNVNFQKAIS---- 686
            :.||.|.          .|....|....:...:|.:..:....||.:|    |....:.:|    
  Fly   593 LRSYELS----------DVNTPMGSPGKESGVITMSNTDYFIEKEAES----NPALDREVSTGPE 643

  Rat   687 -EKLGQYSSPDTKRCCQDGMTKLPMARTCEQRAARVPQPACREPFLSCCKFAEDLRRNQTRSQAG 750
             :||......|.....:..:..||..:. ....:..|:|....|           |.:..|..| 
  Fly   644 EDKLTTVRKTDIGPAHKIEVNTLPPGKG-RYAFSYTPKPFWHNP-----------RVHVMRDPA- 695

  Rat   751 LARAQDMLQEEDLIDEDDILVRSFFPENWLWR--VEPVDRSKLLTVWLPDSLTTWEIHGVSLSKS 813
                                      :.||:.  ....|....:...:|..:|:|.:...:|...
  Fly   696 --------------------------DTWLFLNISASSDGRNSIHRRIPSEMTSWVVSAFALDPV 734

  Rat   814 KGLCVAKPT-RVRVFREFHLHLRLPISVRRFEQLELRPVLYNYLSEDVTVSV------------H 865
            .||.::.|. ::..::||::...||.|::|.|.:.:..|::|....|:.|.|            .
  Fly   735 NGLGLSPPNGKLEAYKEFYISTELPYSIKRDELIAIPFVVHNNRDSDLNVEVTFYNSALDFDFPQ 799

  Rat   866 VSP-------VEGLCLAGGGLLAQQ-VSVPAGSARPVAFSVVPTAAASIPLKVVARGSFTIGDAV 922
            :.|       ||        |..:: :.||..|||.|:|.|.|.....:.:|.:|..| ..||.|
  Fly   800 LDPKATNQPKVE--------LYRRRSLQVPGRSARSVSFIVTPKRVGPLLVKAMAASS-QAGDTV 855

  Rat   923 SKILQIEKEGAIHREE----IVYNLDPLNNLGRSLEIPGSSDPNVIPDGDFSSFVRVTASEPLET 983
            .:.|.:|..||:.|..    ...|.:..|....::.:|    .|.||:.     .|:..|...:.
  Fly   856 EQNLLVEHPGAMERINRGFLFELNSNAQNRRNVTIAVP----RNAIPES-----TRIEVSAVGDL 911

  Rat   984 LGSEGALSPGGVASLLRLPRGCAEQTMIYLAPTLTASHYLDRTEQWSKLPPETKDHAVDLIQKGH 1048
            :||    ..|.:.||:.||.||.||||:...|.|....||.|..|   |.||.:..|.:.:..|:
  Fly   912 IGS----LVGNLDSLILLPTGCGEQTMVNFVPNLIVLRYLGRLRQ---LTPEVELRATNNLAIGY 969

  Rat  1049 MRIQQFRKKDGSFGAW---LHRDSSTWLTAFVLKILSLAQEQIGDSPEKLQETAGWLLGQQLDDG 1110
            .||..:|.::|:|.|:   :.| |||||||:|.:.|..|..........||:...:|...|..:|
  Fly   970 QRILYYRHENGAFSAFGLDIKR-SSTWLTAYVARSLRQAAPFTQVDSNVLQKALTYLGSVQSANG 1033

  Rat  1111 SFHDPCPVIHRGMQGGLVGTDETVALTAFVVIALHHGLAVFQDENSQQLKKRVEASITKANSFLG 1175
            .|.:...|..|      .| |:.::|||||.:||...:.::.:..:         :|.||..|: 
  Fly  1034 GFEERGDVFER------FG-DDGISLTAFVTLALMENVDLYPEYRN---------NINKALDFI- 1081

  Rat  1176 QKASAGLLGA---HASAITAYALTLTKASEDLRNVAHNSLMAMAEETGENLYWGSAIGSQDNVVS 1237
               :.||.|:   ||.||..|  .|::|:.:.:......|.:||.......:|            
  Fly  1082 ---TRGLDGSSNLHAMAIGTY--VLSRANHNAKAAFLQRLDSMATNKDGLKWW------------ 1129

  Rat  1238 STPAPRNPSEPVPQAPALW--------IETTAYGLLHLLLREGKGEMADKVATWLTHQGSFQGGF 1294
                  |.:.|..:..:.|        ||.:||..|.||.....|: |..|..||..|.:.:|||
  Fly  1130 ------NKTAPAGEQQSPWYNATRSVNIEISAYAALALLENNLVGD-ALPVLNWLMDQRNPKGGF 1187

  Rat  1295 RSTQDTVVTLDALSAYWIASHTTEEKALNVTLSSMGRNGYKSHLLQLNNHQVKGLEEELKFSLGS 1359
            .::|||||.|.||..:       .|:     .||.|.|      ||:..|..:|.|        :
  Fly  1188 VASQDTVVGLQALLMF-------AER-----FSSQGNN------LQIGFHYGEGAE--------T 1226

  Rat  1360 TINVKVGGNSKGTLKILRTYNVLDMKNTTCQDLRIEVTVTGYVEYTREANEDYEYDYDMPAA--- 1421
            .|||    |::.:|.:.......::||       :.|:.||  .....|...|.|:.::.:|   
  Fly  1227 IINV----NAENSLALQTVELPNNLKN-------LSVSATG--RGMALAQVSYTYNTNVTSAWPR 1278

  Rat  1422 --DDPSVHSQPVTPLQLFEGRRSRRRREAP-----------KAADEQESRVQYTVCIWRNGNLGL 1473
              .||:|:                |...|.           ....|.|.|               
  Fly  1279 FVLDPTVN----------------RNSHADYLHLSACASFVSVVGENEQR--------------- 1312

  Rat  1474 SGMAIADITLLSGFQALRADLEKLTSLSDRYVSHFETDGPH--VLLYFDSVPTTRECVGFGALQE 1536
            |.||:.::.|.|||...|..|..|.| |:| :...||...:  |::|||.:.....|....|.:.
  Fly  1313 SNMAVMEVHLPSGFVVDRDTLPTLES-SER-IKKVETQNRNTKVVIYFDYLDRREVCPTLHAYKT 1375

  Rat  1537 VAVGLVQPASAVLYDYYSPDHKCSVFYAAPTKSKLLSTLCS----ADVCQCAE 1585
            |.|...:|.:.|:||||....:...||.|| ||.:.. :|.    .|:|:.||
  Fly  1376 VKVTKHRPVAVVMYDYYDSARRARQFYRAP-KSNICD-ICEHANCGDLCEKAE 1426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C4aNP_113692.2 A2M_N 139..231 CDD:280081 29/94 (31%)
A2M_N_2 475..608 CDD:285005 34/147 (23%)
ANATO 684..752 CDD:237984 12/72 (17%)
A2M 779..866 CDD:278630 22/101 (22%)
complement_C3_C4_C5 991..1310 CDD:239226 101/332 (30%)
A2M_comp 1046..1312 CDD:284982 80/279 (29%)
A2M_recep 1474..1563 CDD:284981 29/90 (32%)
NTR_complement_C4 1581..1735 CDD:239639 3/5 (60%)
Tep3NP_523507.2 A2M_N 124..215 CDD:280081 28/93 (30%)
A2M_N_2 448..573 CDD:285005 33/145 (23%)
A2M 697..787 CDD:278630 21/89 (24%)
A2M_2 918..1203 CDD:239227 100/329 (30%)
A2M_comp 967..1200 CDD:284982 78/274 (28%)
A2M_recep 1313..1402 CDD:284981 29/90 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166343879
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2373
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D177369at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11412
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.850

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