DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment C4a and Tep2

DIOPT Version :9

Sequence 1:NP_113692.2 Gene:C4a / 24233 RGDID:620005 Length:1737 Species:Rattus norvegicus
Sequence 2:NP_523506.1 Gene:Tep2 / 34044 FlyBaseID:FBgn0041182 Length:1420 Species:Drosophila melanogaster


Alignment Length:1691 Identity:417/1691 - (24%)
Similarity:692/1691 - (40%) Gaps:431/1691 - (25%)


- Green bases have known domain annotations that are detailed below.


  Rat    29 SVVNLGTPLS-------VGVQLLDAPAGQEVKGSVYLRNPTSGPC-SPKKDFKL---SSGN-DFV 81
            |||..||..|       |.|...|.|:  ::|.|:      :||. :..|..:|   |:.| :|.
  Fly    24 SVVGPGTLRSNSKYNVVVSVHKADGPS--QIKVSL------NGPSYNETKQIELPPMSTQNVEFE 80

  Rat    82 LLRLEVPLKDVRSCGLFGLRRAPHIQLVAHSPWLKNTASKATETQGVNLLFSSRRGHIFVQTDQP 146
            :.:|.....::.:.|:.|:             ..||:         ..|.::.::..:|||||:.
  Fly    81 VPKLATGNYNLSAEGVSGV-------------VFKNS---------TKLNYADKKPSVFVQTDKA 123

  Rat   147 IYNPGQRVRYRVFALDQKMRPSTDTLTVTVENSHGLRVRKK---EVFAPTSIFQDDFIIPDISEP 208
            .|.|...|::|:..||:..||:.....::|....|.:.|.|   :|.....:|..:..:.:....
  Fly   124 TYKPADLVQFRILFLDENTRPAKIEKPISVIIIDGAQNRIKQLSDVKLTKGVFSGELQLSEQPVL 188

  Rat   209 GTWKISARFSDGLESNRST-HFEVKKYVLPNFEVKLTPWKPYILTVPSYREEIQLDVQARYVYGK 272
            ||||||... ||  .||.| .|||.|||||.|||.:...|..::.    .:.|:..::|:|.|||
  Fly   189 GTWKISVSV-DG--DNRETKSFEVDKYVLPKFEVIVDTPKAVVIA----DKVIKATIRAKYTYGK 246

  Rat   273 PVQGVA-------YTRFALMDEQGKKSFLRGLETQTKLVEGQTHISI------SRDQFQAALGKV 324
            ||:|.|       |..|..::..|.|      :.:|..|:|:.|:..      .|.|:       
  Fly   247 PVKGKATVSMERSYGYFGDLNANGNK------QEKTIDVDGKGHVEFDIIHWAQRGQY------- 298

  Rat   325 NTEIGDLEGLRLYAAVAVIESPGGEMEEAELTSWPFVSSAFSLDLSHTKQHLVPGAPFLLQALVR 389
                  |..::|:|.|.  |...|..:.|..|. ......:|::.....:|......|:.|.:|:
  Fly   299 ------LPPIKLFAVVT--EELTGNKQNATATV-VLHQQRYSIEPYERPEHFEANKSFIYQVVVK 354

  Rat   390 EMSGSEASDVPVKVSA-TLLSGSDSKVLDFQQ-------------NTNGIGQVSFSIHVPPTITE 440
            .:.||     ||..|| .:..|.|.....|.:             |.|||  .:|::.:|.:.:.
  Fly   355 NVDGS-----PVTNSAKNVKIGFDKSYSYFHEPSPKTRINFEAPVNENGI--ATFNVRLPDSDSR 412

  Rat   441 -LRLLVSAGSLYPAVAKLT--VQAPPSRGPGFLSIEPLDLRSPRVGDTFVLSLRTVGI-PMPTFS 501
             .|:..|.......:..::  ...|.||.|  |.|: ::.:.||:|:.  :|...|.| .:|   
  Fly   413 YYRIFASFDGSENTIGSISKFEPTPMSREP--LKIQ-VNTKKPRLGEQ--VSFDVVSIEDLP--- 469

  Rat   502 HYYYMIISRGQIMAMSREPRRALTSISVLVD---------HHLAPSFYFVAYFYHQGLPVANSLL 557
            ::.|.|::||.::            :|..||         ....|:|..|        |.|...:
  Fly   470 YFVYTIVARGNVI------------LSDYVDVPDGQKTYTVKFTPTFSMV--------PKATIYV 514

  Rat   558 INVQPGDCEGKLELKVDGAKEYRN------------GDSMKLQLQTDSEALVALGAVDTALYAVG 610
            ..|...|.:.: |..:|..||:.|            .:.:||:::||:::.|.|..||.::..: 
  Fly   515 YYVVNNDLQFE-EKTIDFEKEFSNSIDVSAPTNAKPSEEVKLRIKTDADSFVGLLGVDQSVLLL- 577

  Rat   611 GRSHKPLDMSKVFEVMNSYNL------GCG--PGGGDDALQVFQTAGLAFSDGDRLTQTKENLSC 667
             :|...|....:|..:|.|..      |.|  ||         ||:||       :|.|      
  Fly   578 -KSGNDLSQDDIFNSLNIYQTSTPWMNGYGRYPG---------QTSGL-------VTLT------ 619

  Rat   668 PKEKKSRQKRNVNFQKAISEKLGQYSSPDTKRCCQDGMTKLPMARTCEQRAARVPQPACREPFLS 732
                      |.|:         .|::           ..|.|:...|         ..|.|:::
  Fly   620 ----------NANY---------PYNT-----------GPLVMSYVFE---------GSRHPWIT 645

  Rat   733 CCKFAEDLRRNQTRSQAGLARA-QDMLQEEDLIDE--DDILVRSFFPENWLWRVEPVDRSKL-LT 793
            ..::...:|.:.....:.|::: .|...:|.|:.:  ....:|..|||.|.:  |.|...:. ||
  Fly   646 RPRYRVGIRGDSGDRISFLSQSLNDRNLKEILLKQTPQRTTIRKEFPETWFF--ENVGEEEFTLT 708

  Rat   794 VWLPDSLTTWEIHGVSLSKSKGLCVAK-PTRVRVFREFHLHLRLPISVRRFEQLELRPVLYNYLS 857
            ..:||::|:|.:.|.||:.:.|:.:.| |:::|||:.|.:...||.||:|.|.:.:..|::|||.
  Fly   709 KKIPDTITSWVVTGFSLNPTSGIALTKNPSKIRVFQPFFVSTNLPYSVKRGEVIAIPVVIFNYLD 773

  Rat   858 E--DVTVSVHVSPVE-GLCLAGGGLL---------AQQVSVPAGSARPVAFSVVPTAAASIPLKV 910
            :  |..|.:..|..| ....|...:|         .::|::||.|.:.|:|.:.|.......||:
  Fly   774 KTLDADVVMDNSDQEYEFTEATNEVLEKAIDEVRRVKRVTIPANSGKSVSFMIRPKNVGFTTLKI 838

  Rat   911 VARGSFTIGDAVSKILQIEKEGA--IHREEIVYNLDPLNNLGRSLEIPGSSDPN-VIPDGDFSSF 972
            .|..:.. |||:.:.|::|.||.  .....:..||.....:.:||:   :..|| |:|..:|..|
  Fly   839 TATSALA-GDAIHQKLKVEPEGVTLFENRAVFINLKDQPEMSQSLD---ADIPNEVVPQSEFIEF 899

  Rat   973 VRVTASEPLETLGSEGALSP--GGVASLLRLPRGCAEQTMIYLAPTLTASHYLDRTEQWSKLPPE 1035
                     ..:|.  .|.|  ..:.:|:|:|.||.||.|:...|.:....||:.|.:  || |.
  Fly   900 ---------SVVGD--LLGPTLQNLDNLVRMPYGCGEQNMVNFVPNILVLKYLEVTGR--KL-PS 950

  Rat  1036 TKDHAVDLIQKGHMRIQQFRKKDGSFGAWLHRDS--STWLTAFVLKILSLAQEQIGDSPEKLQET 1098
            .:..|...::.|:.|...::..|||:.|:...|:  ||||||:|::....|.......|:.:...
  Fly   951 VESKARKFLEIGYQRELTYKHDDGSYSAFGKSDASGSTWLTAYVMRSFHQAGTYTDIDPKVITAG 1015

  Rat  1099 AGWLLGQQLDDGSFHDPCPVIHRGMQGGLVGTDETVALTAFVVIALHHGLAVFQDENSQQLKKRV 1163
            ..:|:.:|.:.|.|.:...:.....|..|       |||:||::|..        ||.:.:.| .
  Fly  1016 LDFLVSKQKESGEFPEVGKLFDNANQNPL-------ALTSFVLLAFF--------ENHELIPK-Y 1064

  Rat  1164 EASITKANSFLGQKASAGLLGAHASAITAYALTLTKASEDLRNVAHNSLMAMAEETGENLYWGSA 1228
            :::|.||..::.::|.. ....::.||.|.||.|.|..:..:.:|  .|.::|.:..:.::|..|
  Fly  1065 QSAIKKAVRYVAEEADK-TDDQYSLAIAAVALQLAKHPQSEKVIA--KLESVARKENDRMWWSKA 1126

  Rat  1229 ---IGSQDNVVSSTPAPRNPSEPVPQAPALWIETTAYGLLHLLLREGKGEMADKVATWLTHQGSF 1290
               .|....|....|...:            :|.|:|.|| .||.:...|.|..:..||..|.:.
  Fly  1127 TESTGEDGRVFHWKPRSND------------VEITSYVLL-ALLEKDPAEKALPIIKWLISQRNS 1178

  Rat  1291 QGGFRSTQDTVVTLDALSAYWIASHTTEEKALNVTLSSMGRNGYKSHLLQLNNHQVKGLEEELKF 1355
            .|||.||||||:.|.||:.:                      .||:.                  
  Fly  1179 NGGFSSTQDTVIGLQALTKF----------------------AYKTG------------------ 1203

  Rat  1356 SLGSTINVKV--GGNSKGTLK-------ILRTYNVLDMKNTTCQDLRIEVTVTGYVEYTREANED 1411
            |...|::::.  .|.||.|:|       :|:|:   |:..:|   .:::.|..|    |..|...
  Fly  1204 SGSGTMDIEFSSAGESKNTIKVNPENSLVLQTH---DLPKST---RKVDFTAKG----TGSAMVQ 1258

  Rat  1412 YEYDYDMPAAD-DPSVHSQPV---TPLQL-----------FEGRRSRRRREAPKAADEQESRVQY 1461
            ..|.|::...: .||....|.   ||.||           .|        :|.|..|        
  Fly  1259 LSYRYNLAEKEKKPSFKVTPTVKDTPNQLLIVDVCAEYVPLE--------DADKDKD-------- 1307

  Rat  1462 TVCIWRNGNLGLSGMAIADITLLSGFQALRADLEKLTSLSDRYVSHFETDGPH--VLLYFDSV-P 1523
                        |.||:.:|.|.|||......|.|:.:: || |...||....  |::||||: |
  Fly  1308 ------------SNMAVMEIALPSGFVGDSTSLGKIQAV-DR-VKRVETKNSDSTVVVYFDSLTP 1358

  Rat  1524 TTRECVGFGALQEVAVGLVQPASAVLYDYYSPDHKCSVFYAAPTKSKLLSTLCSADVCQ---CAE 1585
            ....|:...|.:..||...:|||..|||||..:.|.:.:|      ::.|:||  |:|:   |.|
  Fly  1359 GDVRCLPLEASKAHAVAKQKPASVSLYDYYDTERKATEYY------QVKSSLC--DICEGADCGE 1415

  Rat  1586 G 1586
            |
  Fly  1416 G 1416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C4aNP_113692.2 A2M_N 139..231 CDD:280081 31/95 (33%)
A2M_N_2 475..608 CDD:285005 34/154 (22%)
ANATO 684..752 CDD:237984 7/67 (10%)
A2M 779..866 CDD:278630 31/90 (34%)
complement_C3_C4_C5 991..1310 CDD:239226 91/325 (28%)
A2M_comp 1046..1312 CDD:284982 74/270 (27%)
A2M_recep 1474..1563 CDD:284981 34/91 (37%)
NTR_complement_C4 1581..1735 CDD:239639 4/9 (44%)
Tep2NP_523506.1 A2M_N 115..209 CDD:280081 31/96 (32%)
A2M_N_2 445..576 CDD:285005 35/157 (22%)
A2M 694..782 CDD:278630 31/89 (35%)
A2M_2 909..1198 CDD:239227 90/323 (28%)
A2M_comp 961..1199 CDD:284982 74/291 (25%)
A2M_recep 1308..1398 CDD:284981 34/91 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166343880
Domainoid 1 1.000 50 1.000 Domainoid score I11352
eggNOG 1 0.900 - - E1_COG2373
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D177369at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11412
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.850

Return to query results.
Submit another query.