DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Kcng1 and Shawl

DIOPT Version :9

Sequence 1:NP_001074603.1 Gene:Kcng1 / 241794 MGIID:3616086 Length:514 Species:Mus musculus
Sequence 2:NP_001097131.2 Gene:Shawl / 5740840 FlyBaseID:FBgn0085395 Length:937 Species:Drosophila melanogaster


Alignment Length:554 Identity:150/554 - (27%)
Similarity:234/554 - (42%) Gaps:171/554 - (30%)


- Green bases have known domain annotations that are detailed below.


Mouse    60 DRRRQIIINVGGIKYSLPWTTLDEFPLTRLGQL-KACTNFDDILSVCDDYDVTCNEFFFDRNPGA 123
            |...:||:||.||:|.....||.:.|.|||.:| :|..|:|.:|          ||:||||:||.
  Fly     2 DGENRIILNVSGIRYETYKATLKKIPATRLSRLTEALANYDPVL----------NEYFFDRHPGV 56

Mouse   124 FGTILTFLRAGKLRLLREMCALSFQEELLYWGIAEDHLDGCCKRRYLQKIEEFAEMMEREEEE-- 186
            |..||.:.|.|||....::|...|:|||.:||:..:.::.||...|         .:.|:.:.  
  Fly    57 FTQILNYYRTGKLHYPTDVCGPLFEEELEFWGLDSNQVEPCCWSTY---------SIHRDTQNTL 112

Mouse   187 EPLDSEDQESEGP-------------SASEGRLSRCMRRLRD----MVERPHSGLPGKVFACLSV 234
            ..||..|.|:|.|             :.|.|.|: |.:|::.    |.:.|.|....|:.|.:||
  Fly   113 AILDKLDIENEKPTEEQIARLFGFEEALSNGELN-CWQRIKPKIWAMFDEPSSSTGAKIVAGMSV 176

Mouse   235 LFVTVTAVNLSVSTLPSLREE-------------------------------------------- 255
            .|:.|:.::..:.|.|..|.:                                            
  Fly   177 FFIFVSVISFCLKTHPGFRVDLPSGAHDAHGPGAGGPPHGHDPMGEPPQTHQYHQHSITPPSGSI 241

Mouse   256 -----------------EEQGQCSQMC-----------------------------HN------- 267
                             ...||.:.:.                             ||       
  Fly   242 GPTFRVTNYTSYSSGNFTASGQATPIATIKGGQRQRLKRNINGSILNEFIEEKILGHNGRRKHGW 306

Mouse   268 ----------VFIVESVCVGWFSLEFLLRFIQAPSKFAFLRSPLTLIDLVAILPYYVTLLVDGAA 322
                      .|.||.||..||.:|.::|.|.:|:.:.|::||:.:||..|.|.:|..::     
  Fly   307 IETYGQPHEAFFYVELVCNVWFFIEVIIRLIVSPNLWQFIKSPVNIIDFTATLSFYTDVM----- 366

Mouse   323 SSRRKPSTGNSYLDKVGLVLRVLRALRILYVMRLARHSLGLQTLGLTARRCTREFGLLLLFLCVA 387
             .|....||         :|.....:||:.:.:|.|||.||:.|..|.:...:|..||:.||.:.
  Fly   367 -QRMGEYTG---------LLEAFSIVRIMRLFKLTRHSPGLRILIHTFKASAKELTLLVFFLVLG 421

Mouse   388 IALFAPLLYVIENEMADSP--EFTSIPACYWWAVITMTTVGYGDMVPRSTPGQVVALSSILSGIL 450
            |..||.|.|..| ::.|:|  :|.|||...|||::|||||||||:.|::.||..|.....|:|:|
  Fly   422 IVFFASLAYYAE-KLQDNPDNQFKSIPLGLWWAIVTMTTVGYGDVAPKTYPGMFVGALCALAGVL 485

Mouse   451 LMAFPVT------SIFHTFSRSYLELKQEQERVL 478
            .:|.||.      |:|::.:::..:|.:::.|||
  Fly   486 TIALPVPVIVSNFSMFYSHTQARSKLPKKRRRVL 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kcng1NP_001074603.1 BTB_POZ_KCNG1_2 60..173 CDD:349728 44/113 (39%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 180..205 8/39 (21%)
Ion_trans 227..471 CDD:395416 87/358 (24%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 424..429 4/4 (100%)
ShawlNP_001097131.2 BTB 7..99 CDD:197585 41/101 (41%)
BTB_2 7..97 CDD:280393 40/99 (40%)
Ion_trans 307..506 CDD:278921 74/214 (35%)
Ion_trans_2 <449..499 CDD:285168 22/49 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.900

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